Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.76□□□□□ -1.65
ACLYP53396 RPL23AP81-201ENST00000455252 467 ntBASIC4.76□□□□□ -1.65
ACLYP53396 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.76□□□□□ -1.65
ACLYP53396 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
ACLYP53396 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ACLYP53396 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.76□□□□□ -1.65
ACLYP53396 RPS27AP18-201ENST00000515536 459 ntBASIC4.76□□□□□ -1.65
ACLYP53396 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.76□□□□□ -1.65
ACLYP53396 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.76□□□□□ -1.65
ACLYP53396 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.76□□□□□ -1.65
ACLYP53396 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.76□□□□□ -1.65
ACLYP53396 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.76□□□□□ -1.65
ACLYP53396 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ACLYP53396 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.76□□□□□ -1.65
ACLYP53396 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ACLYP53396 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.76□□□□□ -1.65
ACLYP53396 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ACLYP53396 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
ACLYP53396 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.75□□□□□ -1.65
ACLYP53396 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
ACLYP53396 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.75□□□□□ -1.65
ACLYP53396 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.75□□□□□ -1.65
ACLYP53396 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ACLYP53396 AL359643.1-201ENST00000404109 423 ntBASIC4.75□□□□□ -1.65
ACLYP53396 SNORA11.1-201ENST00000408133 129 ntBASIC4.75□□□□□ -1.65
ACLYP53396 MIR1271-201ENST00000408537 86 ntBASIC4.75□□□□□ -1.65
ACLYP53396 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.75□□□□□ -1.65
ACLYP53396 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.75□□□□□ -1.65
ACLYP53396 AC062016.2-201ENST00000420950 676 ntBASIC4.75□□□□□ -1.65
ACLYP53396 RPL21P91-201ENST00000429231 479 ntBASIC4.75□□□□□ -1.65
ACLYP53396 AC018644.1-201ENST00000429934 551 ntBASIC4.75□□□□□ -1.65
ACLYP53396 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.75□□□□□ -1.65
ACLYP53396 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ACLYP53396 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.75□□□□□ -1.65
ACLYP53396 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.75□□□□□ -1.65
ACLYP53396 VN1R32P-201ENST00000452234 905 ntBASIC4.75□□□□□ -1.65
ACLYP53396 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.75□□□□□ -1.65
ACLYP53396 RPL23AP2-201ENST00000471227 466 ntBASIC4.75□□□□□ -1.65
ACLYP53396 AC020890.1-201ENST00000491837 504 ntBASIC4.75□□□□□ -1.65
ACLYP53396 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.75□□□□□ -1.65
ACLYP53396 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.75□□□□□ -1.65
ACLYP53396 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.75□□□□□ -1.65
ACLYP53396 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.75□□□□□ -1.65
ACLYP53396 SETP1-201ENST00000556014 845 ntBASIC4.75□□□□□ -1.65
ACLYP53396 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.75□□□□□ -1.65
ACLYP53396 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.75□□□□□ -1.65
ACLYP53396 AC122134.1-201ENST00000565664 1104 ntBASIC4.75□□□□□ -1.65
ACLYP53396 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.75□□□□□ -1.65
ACLYP53396 AC010615.3-201ENST00000597319 394 ntBASIC4.75□□□□□ -1.65
ACLYP53396 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.75□□□□□ -1.65
ACLYP53396 AC008966.2-201ENST00000606157 453 ntBASIC4.75□□□□□ -1.65
ACLYP53396 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.75□□□□□ -1.65
ACLYP53396 AP005212.4-201ENST00000614206 710 ntBASIC4.75□□□□□ -1.65
ACLYP53396 AC091905.2-201ENST00000623143 306 ntBASIC4.75□□□□□ -1.65
ACLYP53396 AL022393.1-201ENST00000625142 1677 ntBASIC4.75□□□□□ -1.65
ACLYP53396 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ACLYP53396 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
ACLYP53396 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
ACLYP53396 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.75□□□□□ -1.65
ACLYP53396 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ACLYP53396 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
ACLYP53396 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.75□□□□□ -1.65
ACLYP53396 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
ACLYP53396 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ACLYP53396 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ACLYP53396 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ACLYP53396 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ACLYP53396 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
ACLYP53396 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.74□□□□□ -1.65
ACLYP53396 AL672167.1-204ENST00000641875 3017 ntBASIC4.74□□□□□ -1.65
ACLYP53396 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
ACLYP53396 RNU1-20P-201ENST00000363314 162 ntBASIC4.74□□□□□ -1.65
ACLYP53396 RNA5SP387-201ENST00000364226 106 ntBASIC4.74□□□□□ -1.65
ACLYP53396 MIR200C-201ENST00000384980 68 ntBASIC4.74□□□□□ -1.65
ACLYP53396 RNA5SP372-201ENST00000390836 115 ntBASIC4.74□□□□□ -1.65
ACLYP53396 TCEA1P4-201ENST00000415066 844 ntBASIC4.74□□□□□ -1.65
ACLYP53396 EIF1P3-201ENST00000423841 334 ntBASIC4.74□□□□□ -1.65
ACLYP53396 RPL37P1-201ENST00000432310 284 ntBASIC4.74□□□□□ -1.65
ACLYP53396 GOT2P5-201ENST00000433995 546 ntBASIC4.74□□□□□ -1.65
ACLYP53396 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.74□□□□□ -1.65
ACLYP53396 AL157385.1-201ENST00000446973 268 ntBASIC4.74□□□□□ -1.65
ACLYP53396 DDX39BP2-208ENST00000453923 258 ntBASIC4.74□□□□□ -1.65
ACLYP53396 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.74□□□□□ -1.65
ACLYP53396 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ACLYP53396 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.74□□□□□ -1.65
ACLYP53396 AC018442.3-201ENST00000523025 183 ntBASIC4.74□□□□□ -1.65
ACLYP53396 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.74□□□□□ -1.65
ACLYP53396 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.74□□□□□ -1.65
ACLYP53396 AC011270.1-201ENST00000558606 583 ntBASIC4.74□□□□□ -1.65
ACLYP53396 HSPE1P5-201ENST00000561489 272 ntBASIC4.74□□□□□ -1.65
ACLYP53396 AC233702.9-201ENST00000581528 203 ntBASIC4.74□□□□□ -1.65
ACLYP53396 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ACLYP53396 AC008739.3-201ENST00000603262 127 ntBASIC4.74□□□□□ -1.65
ACLYP53396 AC090912.3-201ENST00000609775 533 ntBASIC4.74□□□□□ -1.65
ACLYP53396 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.74□□□□□ -1.65
ACLYP53396 AC015914.2-201ENST00000618167 288 ntBASIC4.74□□□□□ -1.65
ACLYP53396 CR392039.5-201ENST00000623201 510 ntBASIC4.74□□□□□ -1.65
ACLYP53396 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.74□□□□□ -1.65
ACLYP53396 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
ACLYP53396 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms