Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RPL21P67-201ENST00000402896 478 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.42□□□□□ -1.54
NEK3P51956 USP9YP22-201ENST00000438971 294 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC007327.1-201ENST00000447461 264 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AURKAPS1-201ENST00000451805 1212 ntBASIC5.42□□□□□ -1.54
NEK3P51956 HMGB3P21-201ENST00000452483 547 ntBASIC5.42□□□□□ -1.54
NEK3P51956 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.42□□□□□ -1.54
NEK3P51956 PNPLA4P1-201ENST00000458328 305 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC092754.1-201ENST00000472975 479 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.42□□□□□ -1.54
NEK3P51956 AC118282.1-201ENST00000506408 765 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.42□□□□□ -1.54
NEK3P51956 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.42□□□□□ -1.54
NEK3P51956 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NEK3P51956 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.42□□□□□ -1.54
NEK3P51956 RNU6-513P-201ENST00000516104 104 ntBASIC5.42□□□□□ -1.54
NEK3P51956 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.42□□□□□ -1.54
NEK3P51956 AP004607.2-201ENST00000533949 322 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.42□□□□□ -1.54
NEK3P51956 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.42□□□□□ -1.54
NEK3P51956 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.42□□□□□ -1.54
NEK3P51956 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 MTND3P13-201ENST00000574391 343 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC008687.2-201ENST00000597865 520 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.42□□□□□ -1.54
NEK3P51956 AC005191.1-201ENST00000603950 358 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC009974.1-201ENST00000608881 455 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC126915.2-201ENST00000610957 190 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC016769.4-201ENST00000616893 535 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC018445.2-201ENST00000622987 260 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.42□□□□□ -1.54
NEK3P51956 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.42□□□□□ -1.54
NEK3P51956 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.42□□□□□ -1.54
NEK3P51956 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.42□□□□□ -1.54
NEK3P51956 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.42□□□□□ -1.54
NEK3P51956 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.42□□□□□ -1.54
NEK3P51956 AC120338.1-201ENST00000625074 1541 ntBASIC5.42□□□□□ -1.54
NEK3P51956 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.42□□□□□ -1.54
NEK3P51956 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 AC093591.2-201ENST00000565254 3843 ntBASIC5.42□□□□□ -1.54
NEK3P51956 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.42□□□□□ -1.54
NEK3P51956 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
NEK3P51956 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
NEK3P51956 AC104118.1-201ENST00000607625 1589 ntBASIC5.42□□□□□ -1.54
NEK3P51956 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.41□□□□□ -1.54
NEK3P51956 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NEK3P51956 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
NEK3P51956 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NEK3P51956 AC025574.1-201ENST00000554784 1653 ntBASIC5.41□□□□□ -1.54
NEK3P51956 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NEK3P51956 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NEK3P51956 AC025125.1-201ENST00000624743 1922 ntBASIC5.41□□□□□ -1.54
NEK3P51956 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NEK3P51956 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NEK3P51956 snoZ40.1-201ENST00000364540 72 ntBASIC5.41□□□□□ -1.54
NEK3P51956 RNU6-413P-201ENST00000384115 107 ntBASIC5.41□□□□□ -1.54
NEK3P51956 RNU6-636P-201ENST00000384598 107 ntBASIC5.41□□□□□ -1.54
NEK3P51956 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NEK3P51956 DBIP1-201ENST00000401435 260 ntBASIC5.41□□□□□ -1.54
NEK3P51956 FABP12P1-201ENST00000401911 322 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AL121978.1-201ENST00000402778 359 ntBASIC5.41□□□□□ -1.54
NEK3P51956 SPTLC1P2-201ENST00000407089 121 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AL139098.1-201ENST00000407291 389 ntBASIC5.41□□□□□ -1.54
NEK3P51956 DPPA2P3-201ENST00000411853 655 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.41□□□□□ -1.54
NEK3P51956 SSR1P2-201ENST00000415208 787 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AL356320.2-201ENST00000417263 507 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC008280.1-201ENST00000418851 412 ntBASIC5.41□□□□□ -1.54
NEK3P51956 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.41□□□□□ -1.54
NEK3P51956 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC093655.2-201ENST00000425735 631 ntBASIC5.41□□□□□ -1.54
NEK3P51956 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.41□□□□□ -1.54
NEK3P51956 NANOGP2-201ENST00000435391 727 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC105402.2-201ENST00000438503 358 ntBASIC5.41□□□□□ -1.54
NEK3P51956 RPS26P56-201ENST00000444468 240 ntBASIC5.41□□□□□ -1.54
NEK3P51956 RPL7P59-201ENST00000447700 943 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC104306.1-201ENST00000449702 371 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.41□□□□□ -1.54
NEK3P51956 AL035090.1-201ENST00000454835 332 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC005532.2-201ENST00000467154 373 ntBASIC5.41□□□□□ -1.54
NEK3P51956 RN7SL222P-201ENST00000476452 299 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC069304.1-201ENST00000491593 704 ntBASIC5.41□□□□□ -1.54
NEK3P51956 DYNLL1P6-201ENST00000503440 264 ntBASIC5.41□□□□□ -1.54
NEK3P51956 BOLA3P3-201ENST00000505182 232 ntBASIC5.41□□□□□ -1.54
NEK3P51956 KRT19P6-201ENST00000510983 209 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC005351.1-201ENST00000511152 786 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC100784.1-201ENST00000522790 310 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.41□□□□□ -1.54
NEK3P51956 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.41□□□□□ -1.54
NEK3P51956 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.41□□□□□ -1.54
NEK3P51956 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.41□□□□□ -1.54
NEK3P51956 AC090695.1-201ENST00000561269 1222 ntBASIC5.41□□□□□ -1.54
NEK3P51956 BNIP3P32-201ENST00000600015 554 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC069307.1-201ENST00000602820 447 ntBASIC5.41□□□□□ -1.54
NEK3P51956 AC069304.3-201ENST00000603938 1084 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms