Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCN3P51790 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCN3P51790 AC107068.1-201ENST00000563286 4218 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
CLCN3P51790 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CLCN3P51790 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCN3P51790 MIR320B1-201ENST00000390209 79 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CLCN3P51790 AL080315.1-201ENST00000406055 466 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AL024507.1-201ENST00000412741 274 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCN3P51790 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCN3P51790 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCN3P51790 RPS12P10-201ENST00000427031 377 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCN3P51790 RPL21P133-201ENST00000443666 476 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 HMGN1P5-201ENST00000448591 263 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCN3P51790 AL935212.3-201ENST00000450729 284 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 ISCUP1-201ENST00000454451 448 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 SEPT7P3-201ENST00000455017 621 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.05□□□□□ -1.6
CLCN3P51790 AC011276.1-201ENST00000469688 323 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCN3P51790 AC093267.1-201ENST00000489176 961 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 OR5H3P-201ENST00000502817 919 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AC083829.1-201ENST00000503756 657 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AC118282.1-201ENST00000506408 765 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCN3P51790 PRELID3BP5-201ENST00000508612 460 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCN3P51790 AC138701.1-201ENST00000524329 714 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 OR8G5-201ENST00000524943 1041 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AP000859.1-201ENST00000525536 307 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCN3P51790 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
CLCN3P51790 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.05□□□□□ -1.6
CLCN3P51790 MIR4675-201ENST00000577898 77 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AC005191.1-201ENST00000603950 358 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AC018618.2-201ENST00000604770 446 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCN3P51790 AC007342.8-201ENST00000623278 678 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AP003476.1-201ENST00000623984 516 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 AC083865.1-201ENST00000636634 831 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCN3P51790 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCN3P51790 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
CLCN3P51790 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.05□□□□□ -1.6
CLCN3P51790 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CLCN3P51790 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCN3P51790 CCT8P1-201ENST00000413611 1657 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.05□□□□□ -1.6
CLCN3P51790 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLCN3P51790 CASC19-261ENST00000641853 1638 ntBASIC5.05□□□□□ -1.6
CLCN3P51790 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN3P51790 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN3P51790 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.04□□□□□ -1.6
CLCN3P51790 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN3P51790 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.04□□□□□ -1.6
CLCN3P51790 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN3P51790 AL022322.2-201ENST00000624072 20397 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLCN3P51790 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN3P51790 SNORD56.4-201ENST00000363883 71 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN3P51790 RNU6-185P-201ENST00000384421 107 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 RPL23AP59-201ENST00000399415 461 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 HMGB3P19-201ENST00000403971 560 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 HMGB1P13-201ENST00000406019 642 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN3P51790 AC010385.1-201ENST00000412374 256 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 EIF4A1P1-201ENST00000420241 934 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCN3P51790 AC073310.1-201ENST00000423226 1033 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 DPY19L1P2-201ENST00000426647 915 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 AP001324.1-201ENST00000428553 399 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.04□□□□□ -1.6
CLCN3P51790 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN3P51790 MTCO1P52-201ENST00000433928 531 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.04□□□□□ -1.6
CLCN3P51790 FHP1-201ENST00000442741 703 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 AL035551.1-201ENST00000446931 348 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN3P51790 AL133244.1-201ENST00000456007 258 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 AC093801.2-201ENST00000503966 1050 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCN3P51790 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCN3P51790 ASNSP4-201ENST00000511103 447 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 AC093840.1-201ENST00000511599 336 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.04□□□□□ -1.6
CLCN3P51790 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCN3P51790 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCN3P51790 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCN3P51790 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.04□□□□□ -1.6
CLCN3P51790 AP000916.1-201ENST00000533869 835 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 AC008083.2-201ENST00000546707 476 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLCN3P51790 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.04□□□□□ -1.6
CLCN3P51790 CD24P2-201ENST00000565486 219 ntBASIC5.04□□□□□ -1.6
CLCN3P51790 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms