Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BRCA2P51587 SNORA80A-201ENST00000363922 136 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 RPL7P60-201ENST00000397636 735 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.28□□□□□ -1.72
BRCA2P51587 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.28□□□□□ -1.72
BRCA2P51587 AC025750.2-201ENST00000442609 450 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 VN1R32P-201ENST00000452234 905 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.28□□□□□ -1.72
BRCA2P51587 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
BRCA2P51587 TMED11P-201ENST00000479478 690 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 RPL21P13-201ENST00000488305 481 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 AC010342.1-201ENST00000514047 877 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.28□□□□□ -1.72
BRCA2P51587 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.28□□□□□ -1.72
BRCA2P51587 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.28□□□□□ -1.72
BRCA2P51587 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.28□□□□□ -1.72
BRCA2P51587 AC007823.1-201ENST00000569932 1566 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.28□□□□□ -1.72
BRCA2P51587 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.28□□□□□ -1.72
BRCA2P51587 RNA5SP80-201ENST00000410475 111 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.28□□□□□ -1.72
BRCA2P51587 RPS17P13-201ENST00000448974 407 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.28□□□□□ -1.72
BRCA2P51587 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.28□□□□□ -1.72
BRCA2P51587 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.28□□□□□ -1.72
BRCA2P51587 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.28□□□□□ -1.72
BRCA2P51587 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
BRCA2P51587 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
BRCA2P51587 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
BRCA2P51587 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BRCA2P51587 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
BRCA2P51587 AC087650.1-201ENST00000431445 468 ntBASIC4.27□□□□□ -1.73
BRCA2P51587 RAD23BP3-201ENST00000454157 1152 ntBASIC4.27□□□□□ -1.73
BRCA2P51587 AC006511.1-201ENST00000470614 315 ntBASIC4.27□□□□□ -1.73
BRCA2P51587 RPL29P14-201ENST00000495837 428 ntBASIC4.27□□□□□ -1.73
BRCA2P51587 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.27□□□□□ -1.73
BRCA2P51587 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BRCA2P51587 AL353743.1-202ENST00000431724 1695 ntBASIC4.27□□□□□ -1.73
BRCA2P51587 AL022393.1-201ENST00000625142 1677 ntBASIC4.27□□□□□ -1.73
BRCA2P51587 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BRCA2P51587 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BRCA2P51587 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.27□□□□□ -1.73
BRCA2P51587 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.27□□□□□ -1.73
BRCA2P51587 OTUD4P1-201ENST00000237841 3067 ntBASIC4.27□□□□□ -1.73
BRCA2P51587 Z97055.1-201ENST00000419730 712 ntBASIC4.27□□□□□ -1.73
BRCA2P51587 NMNAT1P2-201ENST00000435192 860 ntBASIC4.27□□□□□ -1.73
BRCA2P51587 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.27□□□□□ -1.73
BRCA2P51587 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.27□□□□□ -1.73
BRCA2P51587 RN7SKP18-201ENST00000516005 275 ntBASIC4.27□□□□□ -1.73
BRCA2P51587 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BRCA2P51587 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
BRCA2P51587 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BRCA2P51587 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.27□□□□□ -1.73
BRCA2P51587 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.27□□□□□ -1.73
BRCA2P51587 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BRCA2P51587 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
BRCA2P51587 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.27□□□□□ -1.73
BRCA2P51587 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
BRCA2P51587 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
BRCA2P51587 AC012213.2-201ENST00000562917 4597 ntBASIC4.26□□□□□ -1.73
BRCA2P51587 OR10J6P-201ENST00000289731 930 ntBASIC4.26□□□□□ -1.73
BRCA2P51587 MIR449A-201ENST00000362113 91 ntBASIC4.26□□□□□ -1.73
BRCA2P51587 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.26□□□□□ -1.73
BRCA2P51587 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.26□□□□□ -1.73
BRCA2P51587 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.26□□□□□ -1.73
BRCA2P51587 RPL12P50-201ENST00000603116 116 ntBASIC4.26□□□□□ -1.73
BRCA2P51587 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.26□□□□□ -1.73
BRCA2P51587 AC004944.1-201ENST00000517807 3059 ntBASIC4.26□□□□□ -1.73
BRCA2P51587 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BRCA2P51587 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
BRCA2P51587 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
BRCA2P51587 AC239868.2-201ENST00000564237 4527 ntBASIC4.26□□□□□ -1.73
BRCA2P51587 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
BRCA2P51587 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BRCA2P51587 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BRCA2P51587 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
BRCA2P51587 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
BRCA2P51587 ZNF602P-201ENST00000405929 924 ntBASIC4.26□□□□□ -1.73
BRCA2P51587 BTF3P5-201ENST00000457252 467 ntBASIC4.26□□□□□ -1.73
BRCA2P51587 PHBP14-201ENST00000512887 367 ntBASIC4.26□□□□□ -1.73
BRCA2P51587 AC084759.1-201ENST00000561168 290 ntBASIC4.26□□□□□ -1.73
BRCA2P51587 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.26□□□□□ -1.73
BRCA2P51587 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
BRCA2P51587 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BRCA2P51587 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.25□□□□□ -1.73
BRCA2P51587 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BRCA2P51587 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.25□□□□□ -1.73
BRCA2P51587 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
BRCA2P51587 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BRCA2P51587 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.25□□□□□ -1.73
BRCA2P51587 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
BRCA2P51587 AL031595.3-201ENST00000624919 14262 ntBASIC4.25□□□□□ -1.73
BRCA2P51587 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
BRCA2P51587 UBA52P6-201ENST00000399822 382 ntBASIC4.25□□□□□ -1.73
BRCA2P51587 AC096644.3-201ENST00000416788 338 ntBASIC4.25□□□□□ -1.73
BRCA2P51587 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.25□□□□□ -1.73
BRCA2P51587 OSTCP5-201ENST00000425293 453 ntBASIC4.25□□□□□ -1.73
BRCA2P51587 EIF4A1P11-201ENST00000451239 222 ntBASIC4.25□□□□□ -1.73
BRCA2P51587 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.25□□□□□ -1.73
BRCA2P51587 RNA5SP303-201ENST00000516192 130 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms