Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.83□□□□□ -1.8
SRP9P49458 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.83□□□□□ -1.8
SRP9P49458 MIR4330-201ENST00000579077 105 ntBASIC3.83□□□□□ -1.8
SRP9P49458 SNORD39.2-201ENST00000579995 76 ntBASIC3.83□□□□□ -1.8
SRP9P49458 MIR432-201ENST00000606207 94 ntBASIC3.83□□□□□ -1.8
SRP9P49458 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.83□□□□□ -1.8
SRP9P49458 AC103858.2-201ENST00000621471 543 ntBASIC3.83□□□□□ -1.8
SRP9P49458 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRP9P49458 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRP9P49458 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.83□□□□□ -1.8
SRP9P49458 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.83□□□□□ -1.8
SRP9P49458 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRP9P49458 AC114546.3-201ENST00000623582 1734 ntBASIC3.83□□□□□ -1.8
SRP9P49458 AC090017.1-201ENST00000548612 1779 ntBASIC3.83□□□□□ -1.8
SRP9P49458 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.83□□□□□ -1.8
SRP9P49458 AC018555.1-201ENST00000567548 1980 ntBASIC3.83□□□□□ -1.8
SRP9P49458 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRP9P49458 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.83□□□□□ -1.8
SRP9P49458 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SRP9P49458 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.83□□□□□ -1.8
SRP9P49458 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SRP9P49458 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SRP9P49458 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.82□□□□□ -1.8
SRP9P49458 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SRP9P49458 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SRP9P49458 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SRP9P49458 MIR129-1-201ENST00000384972 72 ntBASIC3.82□□□□□ -1.8
SRP9P49458 SNORA11B-201ENST00000408175 129 ntBASIC3.82□□□□□ -1.8
SRP9P49458 MIR1183-201ENST00000408856 89 ntBASIC3.82□□□□□ -1.8
SRP9P49458 RN7SKP177-201ENST00000410567 355 ntBASIC3.82□□□□□ -1.8
SRP9P49458 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.82□□□□□ -1.8
SRP9P49458 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.82□□□□□ -1.8
SRP9P49458 RPL12P28-201ENST00000430852 489 ntBASIC3.82□□□□□ -1.8
SRP9P49458 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.82□□□□□ -1.8
SRP9P49458 AL133477.1-201ENST00000457472 514 ntBASIC3.82□□□□□ -1.8
SRP9P49458 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.82□□□□□ -1.8
SRP9P49458 AC025554.1-201ENST00000505641 188 ntBASIC3.82□□□□□ -1.8
SRP9P49458 AC093720.1-201ENST00000505681 714 ntBASIC3.82□□□□□ -1.8
SRP9P49458 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SRP9P49458 AP001804.2-201ENST00000533932 910 ntBASIC3.82□□□□□ -1.8
SRP9P49458 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.82□□□□□ -1.8
SRP9P49458 AC091515.1-201ENST00000548110 679 ntBASIC3.82□□□□□ -1.8
SRP9P49458 AC084783.1-201ENST00000565846 910 ntBASIC3.82□□□□□ -1.8
SRP9P49458 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.82□□□□□ -1.8
SRP9P49458 AC008782.1-201ENST00000603386 430 ntBASIC3.82□□□□□ -1.8
SRP9P49458 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.82□□□□□ -1.8
SRP9P49458 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.82□□□□□ -1.8
SRP9P49458 AC010435.1-201ENST00000623353 1177 ntBASIC3.82□□□□□ -1.8
SRP9P49458 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
SRP9P49458 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.82□□□□□ -1.8
SRP9P49458 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SRP9P49458 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRP9P49458 BX005019.1-201ENST00000561881 1810 ntBASIC3.81□□□□□ -1.8
SRP9P49458 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.81□□□□□ -1.8
SRP9P49458 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SRP9P49458 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SRP9P49458 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRP9P49458 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRP9P49458 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SRP9P49458 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRP9P49458 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SRP9P49458 RNA5SP332-201ENST00000391063 115 ntBASIC3.81□□□□□ -1.8
SRP9P49458 TRIM60P17-201ENST00000415181 719 ntBASIC3.81□□□□□ -1.8
SRP9P49458 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.81□□□□□ -1.8
SRP9P49458 MTND2P11-201ENST00000423638 648 ntBASIC3.81□□□□□ -1.8
SRP9P49458 MTND4LP13-201ENST00000425022 298 ntBASIC3.81□□□□□ -1.8
SRP9P49458 DNAJC19P7-201ENST00000428811 344 ntBASIC3.81□□□□□ -1.8
SRP9P49458 AL132765.1-201ENST00000434165 553 ntBASIC3.81□□□□□ -1.8
SRP9P49458 CEACAMP9-201ENST00000442990 513 ntBASIC3.81□□□□□ -1.8
SRP9P49458 CASP3P1-201ENST00000446037 609 ntBASIC3.81□□□□□ -1.8
SRP9P49458 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.81□□□□□ -1.8
SRP9P49458 HMGB3P22-202ENST00000451823 572 ntBASIC3.81□□□□□ -1.8
SRP9P49458 RPL5P32-201ENST00000454085 879 ntBASIC3.81□□□□□ -1.8
SRP9P49458 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.81□□□□□ -1.8
SRP9P49458 snoU13.1-201ENST00000459157 104 ntBASIC3.81□□□□□ -1.8
SRP9P49458 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.81□□□□□ -1.8
SRP9P49458 RPS27AP17-201ENST00000463344 455 ntBASIC3.81□□□□□ -1.8
SRP9P49458 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.81□□□□□ -1.8
SRP9P49458 FTH1P9-201ENST00000513251 355 ntBASIC3.81□□□□□ -1.8
SRP9P49458 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.81□□□□□ -1.8
SRP9P49458 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.81□□□□□ -1.8
SRP9P49458 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.81□□□□□ -1.8
SRP9P49458 RPL23AP97-201ENST00000568955 471 ntBASIC3.81□□□□□ -1.8
SRP9P49458 MIR4700-201ENST00000578311 74 ntBASIC3.81□□□□□ -1.8
SRP9P49458 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SRP9P49458 RPL12P25-202ENST00000598100 674 ntBASIC3.81□□□□□ -1.8
SRP9P49458 AC244505.7-201ENST00000599675 272 ntBASIC3.81□□□□□ -1.8
SRP9P49458 AP000346.3-201ENST00000622821 210 ntBASIC3.81□□□□□ -1.8
SRP9P49458 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SRP9P49458 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRP9P49458 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SRP9P49458 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.81□□□□□ -1.8
SRP9P49458 AL592437.2-201ENST00000421655 2434 ntBASIC3.81□□□□□ -1.8
SRP9P49458 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SRP9P49458 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SRP9P49458 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.8□□□□□ -1.8
SRP9P49458 AL627171.1-201ENST00000618845 1308 ntBASIC3.8□□□□□ -1.8
SRP9P49458 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SRP9P49458 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.8□□□□□ -1.8
SRP9P49458 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms