Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CSNK1A1P48729 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CSNK1A1P48729 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 RNA5SP505-201ENST00000364748 108 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 RNU6-891P-201ENST00000384280 111 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 AL160275.2-201ENST00000412010 394 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 RPA2P2-201ENST00000419698 796 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 UBE2V2P3-201ENST00000433562 437 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 VN1R48P-201ENST00000448149 1036 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 C1DP3-201ENST00000455013 423 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 AC133473.1-201ENST00000455173 299 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 MTND2P28-201ENST00000457540 1044 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 HMGN1P8-201ENST00000463578 288 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 RPL21P126-201ENST00000470049 478 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 MTND6P6-201ENST00000478031 263 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 AC008897.1-201ENST00000494006 347 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 PRELID3BP7-201ENST00000503606 469 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 AC015795.1-201ENST00000513669 327 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 RNU6-347P-201ENST00000516658 105 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 RN7SKP92-201ENST00000517266 244 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 AP001160.4-201ENST00000596971 382 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 AC093765.1-201ENST00000603758 881 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 AL160290.3-201ENST00000604869 165 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 AP006248.2-201ENST00000623309 592 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CSNK1A1P48729 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CSNK1A1P48729 AC017104.4-201ENST00000636283 1592 ntBASIC3.93□□□□□ -1.78
CSNK1A1P48729 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CSNK1A1P48729 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC012618.3-205ENST00000637896 1496 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 RAD17P1-201ENST00000418130 2042 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CSNK1A1P48729 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 RNU6-398P-201ENST00000384143 109 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 MIR192-201ENST00000384915 110 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 MIR320B1-201ENST00000390209 79 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 CYB5AP4-201ENST00000396692 399 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 RPL23AP48-201ENST00000406913 488 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 SNORA74C-2-201ENST00000411179 201 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 UBTFL3-201ENST00000418934 1024 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC007064.3-201ENST00000422608 359 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 HMGB1P32-201ENST00000425971 565 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 RWDD4P2-201ENST00000426392 563 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 RPL12P28-201ENST00000430852 489 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC011998.1-201ENST00000433403 117 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 UBE2V1P3-201ENST00000439651 417 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 AL138878.2-201ENST00000440581 1241 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 UBTFL6-201ENST00000477929 1024 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 MTND3P6-201ENST00000485242 339 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 RWDD4P1-201ENST00000488019 565 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC007686.1-201ENST00000488511 463 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 RN7SL812P-201ENST00000493791 279 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 AK3P4-201ENST00000504283 583 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CSNK1A1P48729 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms