Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL160275.2-201ENST00000412010 394 ntBASIC4.15□□□□□ -1.75
CDX1P47902 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.15□□□□□ -1.75
CDX1P47902 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDX1P47902 AC023347.2-201ENST00000433994 462 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AC234064.1-201ENST00000436312 247 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.15□□□□□ -1.75
CDX1P47902 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDX1P47902 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.15□□□□□ -1.75
CDX1P47902 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.15□□□□□ -1.75
CDX1P47902 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.15□□□□□ -1.75
CDX1P47902 RPL23AP15-201ENST00000450202 459 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.15□□□□□ -1.75
CDX1P47902 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.15□□□□□ -1.75
CDX1P47902 AC005008.1-201ENST00000456151 612 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AC079168.1-201ENST00000458741 345 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AC015724.1-201ENST00000478577 156 ntBASIC4.15□□□□□ -1.75
CDX1P47902 RN7SL727P-201ENST00000482164 296 ntBASIC4.15□□□□□ -1.75
CDX1P47902 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.15□□□□□ -1.75
CDX1P47902 DEFB109F-201ENST00000491870 277 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.15□□□□□ -1.75
CDX1P47902 SNRPCP2-201ENST00000504370 475 ntBASIC4.15□□□□□ -1.75
CDX1P47902 MTATP6P22-201ENST00000507369 598 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AC008885.2-201ENST00000509506 930 ntBASIC4.15□□□□□ -1.75
CDX1P47902 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.15□□□□□ -1.75
CDX1P47902 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.15□□□□□ -1.75
CDX1P47902 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.15□□□□□ -1.75
CDX1P47902 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.15□□□□□ -1.75
CDX1P47902 RPL10P14-201ENST00000565265 298 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.15□□□□□ -1.75
CDX1P47902 MTCO1P40-201ENST00000574371 625 ntBASIC4.15□□□□□ -1.75
CDX1P47902 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.15□□□□□ -1.75
CDX1P47902 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.15□□□□□ -1.75
CDX1P47902 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.15□□□□□ -1.75
CDX1P47902 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.15□□□□□ -1.75
CDX1P47902 Z82195.1-201ENST00000604558 398 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AL392112.1-201ENST00000605115 829 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AC016769.4-201ENST00000616893 535 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AC090527.3-201ENST00000619041 548 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AL391262.2-201ENST00000622466 494 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AC067931.1-201ENST00000624190 671 ntBASIC4.15□□□□□ -1.75
CDX1P47902 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.15□□□□□ -1.75
CDX1P47902 AC004808.1-201ENST00000627671 721 ntBASIC4.15□□□□□ -1.75
CDX1P47902 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
CDX1P47902 CASC19-222ENST00000641321 1173 ntBASIC4.15□□□□□ -1.75
CDX1P47902 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.15□□□□□ -1.75
CDX1P47902 C4BPAP1-201ENST00000415474 1893 ntBASIC4.15□□□□□ -1.75
CDX1P47902 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDX1P47902 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CDX1P47902 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDX1P47902 AL627171.1-201ENST00000618845 1308 ntBASIC4.15□□□□□ -1.75
CDX1P47902 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CDX1P47902 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDX1P47902 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDX1P47902 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.14□□□□□ -1.75
CDX1P47902 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDX1P47902 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDX1P47902 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDX1P47902 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDX1P47902 AC011493.1-201ENST00000596753 1632 ntBASIC4.14□□□□□ -1.75
CDX1P47902 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDX1P47902 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDX1P47902 AC092435.4-201ENST00000623012 4159 ntBASIC4.14□□□□□ -1.75
CDX1P47902 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDX1P47902 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDX1P47902 AC016716.1-201ENST00000265882 708 ntBASIC4.14□□□□□ -1.75
CDX1P47902 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CDX1P47902 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDX1P47902 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CDX1P47902 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDX1P47902 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDX1P47902 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.14□□□□□ -1.75
CDX1P47902 AC004022.2-201ENST00000413824 193 ntBASIC4.14□□□□□ -1.75
CDX1P47902 RPS12P5-201ENST00000423449 371 ntBASIC4.14□□□□□ -1.75
CDX1P47902 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.14□□□□□ -1.75
CDX1P47902 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDX1P47902 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.14□□□□□ -1.75
CDX1P47902 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.14□□□□□ -1.75
CDX1P47902 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.14□□□□□ -1.75
CDX1P47902 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.14□□□□□ -1.75
CDX1P47902 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.14□□□□□ -1.75
CDX1P47902 AC245047.2-201ENST00000441060 530 ntBASIC4.14□□□□□ -1.75
CDX1P47902 EEF1B2P5-201ENST00000444820 548 ntBASIC4.14□□□□□ -1.75
CDX1P47902 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.14□□□□□ -1.75
CDX1P47902 FAR2P1-206ENST00000449736 709 ntBASIC4.14□□□□□ -1.75
CDX1P47902 AC108751.2-201ENST00000469993 231 ntBASIC4.14□□□□□ -1.75
CDX1P47902 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.14□□□□□ -1.75
CDX1P47902 RPL15P21-201ENST00000495592 567 ntBASIC4.14□□□□□ -1.75
CDX1P47902 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.14□□□□□ -1.75
CDX1P47902 AC026414.1-201ENST00000504046 698 ntBASIC4.14□□□□□ -1.75
CDX1P47902 RPS4XP20-201ENST00000505751 772 ntBASIC4.14□□□□□ -1.75
CDX1P47902 MTATP6P9-201ENST00000515039 680 ntBASIC4.14□□□□□ -1.75
CDX1P47902 RNU6-416P-201ENST00000516265 103 ntBASIC4.14□□□□□ -1.75
CDX1P47902 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.14□□□□□ -1.75
CDX1P47902 AC022360.1-201ENST00000521058 340 ntBASIC4.14□□□□□ -1.75
CDX1P47902 NPM1P6-201ENST00000521088 871 ntBASIC4.14□□□□□ -1.75
CDX1P47902 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.14□□□□□ -1.75
CDX1P47902 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.14□□□□□ -1.75
CDX1P47902 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.14□□□□□ -1.75
CDX1P47902 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.14□□□□□ -1.75
CDX1P47902 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms