Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.82□□□□□ -1.48
COL15A1P39059 AC106785.1-201ENST00000565935 262 ntBASIC5.82□□□□□ -1.48
COL15A1P39059 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL15A1P39059 AC008507.2-201ENST00000588402 1176 ntBASIC5.82□□□□□ -1.48
COL15A1P39059 CLIC4P2-201ENST00000601934 717 ntBASIC5.82□□□□□ -1.48
COL15A1P39059 AC126544.2-201ENST00000625174 749 ntBASIC5.82□□□□□ -1.48
COL15A1P39059 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
COL15A1P39059 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COL15A1P39059 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL15A1P39059 CDC27P2-201ENST00000425026 1922 ntBASIC5.82□□□□□ -1.48
COL15A1P39059 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL15A1P39059 AC090017.1-201ENST00000548612 1779 ntBASIC5.82□□□□□ -1.48
COL15A1P39059 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL15A1P39059 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL15A1P39059 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.82□□□□□ -1.48
COL15A1P39059 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL15A1P39059 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL15A1P39059 AL359922.3-201ENST00000624779 1670 ntBASIC5.82□□□□□ -1.48
COL15A1P39059 AL022393.1-201ENST00000625142 1677 ntBASIC5.82□□□□□ -1.48
COL15A1P39059 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.82□□□□□ -1.48
COL15A1P39059 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL15A1P39059 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL15A1P39059 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL15A1P39059 RNU1-13P-201ENST00000384499 162 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 AL355615.1-201ENST00000406187 641 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.81□□□□□ -1.48
COL15A1P39059 MTCO2P8-201ENST00000412213 658 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.81□□□□□ -1.48
COL15A1P39059 PTP4A1P1-201ENST00000420539 515 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 MTCO2P23-201ENST00000425216 680 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.81□□□□□ -1.48
COL15A1P39059 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.81□□□□□ -1.48
COL15A1P39059 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.81□□□□□ -1.48
COL15A1P39059 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.81□□□□□ -1.48
COL15A1P39059 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.81□□□□□ -1.48
COL15A1P39059 AL353898.1-201ENST00000444055 238 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 AC114755.5-201ENST00000447760 831 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.81□□□□□ -1.48
COL15A1P39059 AC091544.1-201ENST00000484702 348 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.81□□□□□ -1.48
COL15A1P39059 AC021451.1-201ENST00000523498 1129 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL15A1P39059 AP003066.2-201ENST00000529375 555 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.81□□□□□ -1.48
COL15A1P39059 AC010503.3-201ENST00000594355 540 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 AC091979.2-201ENST00000607514 214 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 AC112503.1-201ENST00000608436 391 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 AC124016.2-201ENST00000610058 665 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.81□□□□□ -1.48
COL15A1P39059 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.81□□□□□ -1.48
COL15A1P39059 AL590396.4-201ENST00000636779 956 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 PROS2P-201ENST00000474651 1951 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 AC100871.1-201ENST00000507871 1456 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL15A1P39059 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL15A1P39059 AP001284.1-201ENST00000528393 2118 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
COL15A1P39059 AC004656.1-201ENST00000568479 4951 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL15A1P39059 AL359715.4-201ENST00000606629 1436 ntBASIC5.81□□□□□ -1.48
COL15A1P39059 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
COL15A1P39059 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.81□□□□□ -1.48
COL15A1P39059 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
COL15A1P39059 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL15A1P39059 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.81□□□□□ -1.48
COL15A1P39059 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL15A1P39059 RNU1-130P-201ENST00000363930 160 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 VN1R51P-201ENST00000411675 945 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 RPL26P37-201ENST00000411983 438 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 RPL23AP26-201ENST00000412728 464 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.8□□□□□ -1.48
COL15A1P39059 MTCYBP7-201ENST00000419540 1134 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 RPS12P10-201ENST00000427031 377 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AP001324.1-201ENST00000428553 399 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL15A1P39059 OR4C10P-201ENST00000434991 931 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 NMNAT1P2-201ENST00000435192 860 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AL138787.1-202ENST00000437804 898 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 AC006994.1-201ENST00000438212 839 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC104164.3-201ENST00000467363 1258 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 UQCRHP4-201ENST00000471686 272 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 RN7SL604P-201ENST00000492589 296 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL15A1P39059 AC098799.3-201ENST00000506095 438 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC096571.1-202ENST00000506634 735 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL15A1P39059 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.8□□□□□ -1.48
COL15A1P39059 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL15A1P39059 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.8□□□□□ -1.48
COL15A1P39059 PSMB7P1-201ENST00000556349 514 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC015912.2-201ENST00000571053 181 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.8□□□□□ -1.48
COL15A1P39059 MTCO2P22-201ENST00000603246 681 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC021851.1-201ENST00000608537 1082 ntBASIC5.8□□□□□ -1.48
COL15A1P39059 AC084824.4-201ENST00000620106 731 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms