Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCLP35914 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCLP35914 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HMGCLP35914 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGCLP35914 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCLP35914 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCLP35914 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGCLP35914 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCLP35914 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCLP35914 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
HMGCLP35914 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGCLP35914 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGCLP35914 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCLP35914 RNA5SP447-201ENST00000363749 119 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 AC093719.1-202ENST00000392735 373 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 SNORA11F-201ENST00000408237 128 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 RN7SKP167-201ENST00000411047 285 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 RPS20P14-201ENST00000412545 360 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCLP35914 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCLP35914 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.39□□□□□ -1.71
HMGCLP35914 AC011998.1-201ENST00000433403 117 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 RPS20P1-201ENST00000434853 354 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGCLP35914 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCLP35914 RPS27AP15-201ENST00000447672 466 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 Z95152.1-201ENST00000453556 656 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCLP35914 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGCLP35914 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCLP35914 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCLP35914 AC090819.1-201ENST00000523800 1111 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 OR8K2P-201ENST00000524645 927 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 OR8G5-201ENST00000524943 1041 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCLP35914 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGCLP35914 AC068446.3-201ENST00000555285 382 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.39□□□□□ -1.71
HMGCLP35914 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.39□□□□□ -1.71
HMGCLP35914 AC068790.4-201ENST00000602474 263 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 Z98200.1-201ENST00000607298 470 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 uc_338.13-201ENST00000618243 179 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 AL162233.1-201ENST00000620014 944 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 AL356094.1-201ENST00000624663 1212 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HMGCLP35914 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HMGCLP35914 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGCLP35914 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 AL451142.2-201ENST00000429076 2090 ntBASIC4.39□□□□□ -1.71
HMGCLP35914 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HMGCLP35914 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HMGCLP35914 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HMGCLP35914 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.39□□□□□ -1.71
HMGCLP35914 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
HMGCLP35914 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGCLP35914 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGCLP35914 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HMGCLP35914 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGCLP35914 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGCLP35914 AC011155.1-201ENST00000316512 456 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 RNU4-39P-201ENST00000362455 127 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HMGCLP35914 RNA5SP372-201ENST00000390836 115 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 ST13P16-201ENST00000401760 781 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 EIF4EP1-201ENST00000422311 642 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGCLP35914 AL158073.1-201ENST00000426848 1104 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 RPS26P47-201ENST00000427219 348 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 DNAJC19P7-201ENST00000428811 344 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGCLP35914 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGCLP35914 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGCLP35914 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGCLP35914 CYCSP42-201ENST00000450823 238 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGCLP35914 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGCLP35914 PSMC1P13-201ENST00000458195 985 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 RN7SL98P-201ENST00000462271 300 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 AC010469.1-201ENST00000463864 576 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 RN7SL459P-201ENST00000481078 302 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGCLP35914 ATP1B1P1-201ENST00000509767 915 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.38□□□□□ -1.71
HMGCLP35914 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGCLP35914 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGCLP35914 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGCLP35914 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGCLP35914 AC008745.1-201ENST00000604064 271 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 AL356218.2-201ENST00000605264 187 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 AC090948.2-201ENST00000607363 564 ntBASIC4.38□□□□□ -1.71
HMGCLP35914 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGCLP35914 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGCLP35914 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGCLP35914 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGCLP35914 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGCLP35914 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
HMGCLP35914 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGCLP35914 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms