Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.89□□□□□ -1.63
CTNNA1P35221 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.89□□□□□ -1.63
CTNNA1P35221 AC096992.1-201ENST00000459808 709 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 AC108022.1-201ENST00000493466 478 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNA1P35221 HMGB1P21-201ENST00000502313 581 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA1P35221 SCARNA22-201ENST00000503991 125 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 RNA5SP34-201ENST00000516887 130 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA1P35221 OR5AK3P-201ENST00000527486 1297 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 AC105129.1-201ENST00000560250 297 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 AC027455.1-201ENST00000574104 594 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNA1P35221 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.89□□□□□ -1.63
CTNNA1P35221 RPL7P50-201ENST00000600588 727 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.89□□□□□ -1.63
CTNNA1P35221 AC004948.1-201ENST00000609858 672 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.89□□□□□ -1.63
CTNNA1P35221 AL035461.2-201ENST00000619201 524 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 AC091905.4-201ENST00000623432 202 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 AP002799.1-201ENST00000623552 423 ntBASIC4.89□□□□□ -1.63
CTNNA1P35221 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA1P35221 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTNNA1P35221 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CTNNA1P35221 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA1P35221 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNA1P35221 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA1P35221 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CTNNA1P35221 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA1P35221 RNA5SP305-201ENST00000362665 119 ntBASIC4.88□□□□□ -1.63
CTNNA1P35221 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA1P35221 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA1P35221 AL591848.1-201ENST00000413092 322 ntBASIC4.88□□□□□ -1.63
CTNNA1P35221 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNA1P35221 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA1P35221 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA1P35221 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA1P35221 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNA1P35221 PPIAP20-201ENST00000449839 135 ntBASIC4.88□□□□□ -1.63
CTNNA1P35221 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNNA1P35221 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.88□□□□□ -1.63
CTNNA1P35221 AC110792.2-201ENST00000510278 224 ntBASIC4.88□□□□□ -1.63
CTNNA1P35221 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.88□□□□□ -1.63
CTNNA1P35221 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNNA1P35221 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNNA1P35221 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.88□□□□□ -1.63
CTNNA1P35221 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNNA1P35221 LINC00557-201ENST00000563184 1279 ntBASIC4.88□□□□□ -1.63
CTNNA1P35221 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.88□□□□□ -1.63
CTNNA1P35221 OR7A19P-201ENST00000608051 733 ntBASIC4.88□□□□□ -1.63
CTNNA1P35221 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.88□□□□□ -1.63
CTNNA1P35221 AC016717.3-201ENST00000624730 554 ntBASIC4.88□□□□□ -1.63
CTNNA1P35221 HPVC1-201ENST00000629899 1198 ntBASIC4.88□□□□□ -1.63
CTNNA1P35221 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.88□□□□□ -1.63
CTNNA1P35221 AC083865.1-201ENST00000636634 831 ntBASIC4.88□□□□□ -1.63
CTNNA1P35221 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA1P35221 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTNNA1P35221 OR14L1P-202ENST00000641545 3009 ntBASIC4.88□□□□□ -1.63
CTNNA1P35221 AC135352.1-201ENST00000506173 1418 ntBASIC4.88□□□□□ -1.63
CTNNA1P35221 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNA1P35221 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNA1P35221 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNA1P35221 RNA5SP391-201ENST00000363456 119 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 AL589647.1-201ENST00000402485 466 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 RNU2-65P-201ENST00000410162 185 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNA1P35221 EIF4EP1-201ENST00000422311 642 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNNA1P35221 AC007559.1-201ENST00000428736 355 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 RPL21P91-201ENST00000429231 479 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 OR2B7P-201ENST00000429302 934 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.87□□□□□ -1.63
CTNNA1P35221 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNNA1P35221 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.87□□□□□ -1.63
CTNNA1P35221 AC108463.1-201ENST00000450258 347 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.87□□□□□ -1.63
CTNNA1P35221 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNNA1P35221 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNNA1P35221 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNNA1P35221 BTF3P13-201ENST00000513224 490 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNNA1P35221 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.87□□□□□ -1.63
CTNNA1P35221 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNNA1P35221 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CTNNA1P35221 AC008033.2-201ENST00000542626 177 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNNA1P35221 SNRPGP1-201ENST00000553864 222 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.87□□□□□ -1.63
CTNNA1P35221 AP000919.1-202ENST00000581139 1264 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.87□□□□□ -1.63
CTNNA1P35221 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.87□□□□□ -1.63
CTNNA1P35221 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.87□□□□□ -1.63
CTNNA1P35221 NTAN1P1-201ENST00000603150 646 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 KATNBL1P5-201ENST00000605015 517 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 OR6R2P-201ENST00000609216 300 ntBASIC4.87□□□□□ -1.63
CTNNA1P35221 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CTNNA1P35221 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTNNA1P35221 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms