Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC7.09□□□□□ -1.27
RXRBP28702 USP9YP29-201ENST00000445112 563 ntBASIC7.09□□□□□ -1.27
RXRBP28702 AC003071.1-201ENST00000451219 789 ntBASIC7.09□□□□□ -1.27
RXRBP28702 AC011005.3-201ENST00000491624 395 ntBASIC7.09□□□□□ -1.27
RXRBP28702 FCF1P3-201ENST00000496394 590 ntBASIC7.09□□□□□ -1.27
RXRBP28702 OR5H5P-201ENST00000503164 928 ntBASIC7.09□□□□□ -1.27
RXRBP28702 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC7.09□□□□□ -1.27
RXRBP28702 COX6B1P5-201ENST00000509843 249 ntBASIC7.09□□□□□ -1.27
RXRBP28702 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.09□□□□□ -1.27
RXRBP28702 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC7.09□□□□□ -1.27
RXRBP28702 AC004217.3-201ENST00000551552 878 ntBASIC7.09□□□□□ -1.27
RXRBP28702 AC007224.1-201ENST00000564410 144 ntBASIC7.09□□□□□ -1.27
RXRBP28702 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC7.09□□□□□ -1.27
RXRBP28702 ISCA1P3-201ENST00000577104 373 ntBASIC7.09□□□□□ -1.27
RXRBP28702 AP005403.1-201ENST00000579720 229 ntBASIC7.09□□□□□ -1.27
RXRBP28702 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.09□□□□□ -1.27
RXRBP28702 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.09□□□□□ -1.27
RXRBP28702 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.09□□□□□ -1.27
RXRBP28702 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC7.09□□□□□ -1.27
RXRBP28702 VN1R85P-201ENST00000601587 426 ntBASIC7.09□□□□□ -1.27
RXRBP28702 U73023.1-201ENST00000603134 700 ntBASIC7.09□□□□□ -1.27
RXRBP28702 NDUFA8P1-201ENST00000605525 367 ntBASIC7.09□□□□□ -1.27
RXRBP28702 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.09□□□□□ -1.27
RXRBP28702 AL355974.3-201ENST00000617383 467 ntBASIC7.09□□□□□ -1.27
RXRBP28702 AC012150.2-201ENST00000621300 544 ntBASIC7.09□□□□□ -1.27
RXRBP28702 AC034229.5-201ENST00000624258 185 ntBASIC7.09□□□□□ -1.27
RXRBP28702 AC015726.3-201ENST00000624501 418 ntBASIC7.09□□□□□ -1.27
RXRBP28702 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.09□□□□□ -1.27
RXRBP28702 AC099654.12-201ENST00000639868 649 ntBASIC7.09□□□□□ -1.27
RXRBP28702 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RXRBP28702 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RXRBP28702 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.09□□□□□ -1.27
RXRBP28702 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RXRBP28702 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
RXRBP28702 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.09□□□□□ -1.28
RXRBP28702 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
RXRBP28702 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.09□□□□□ -1.28
RXRBP28702 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.28
RXRBP28702 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
RXRBP28702 AC092447.7-201ENST00000422212 1621 ntBASIC7.09□□□□□ -1.28
RXRBP28702 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
RXRBP28702 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RXRBP28702 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RXRBP28702 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
RXRBP28702 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RXRBP28702 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RXRBP28702 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RXRBP28702 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RXRBP28702 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RXRBP28702 RNU1-87P-201ENST00000363727 170 ntBASIC7.08□□□□□ -1.28
RXRBP28702 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.08□□□□□ -1.28
RXRBP28702 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RXRBP28702 RNU6-114P-201ENST00000384704 105 ntBASIC7.08□□□□□ -1.28
RXRBP28702 SNORA40.2-201ENST00000390847 128 ntBASIC7.08□□□□□ -1.28
RXRBP28702 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.08□□□□□ -1.28
RXRBP28702 RNA5SP113-201ENST00000410486 84 ntBASIC7.08□□□□□ -1.28
RXRBP28702 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.08□□□□□ -1.28
RXRBP28702 NUP35P2-201ENST00000416748 943 ntBASIC7.08□□□□□ -1.28
RXRBP28702 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC7.08□□□□□ -1.28
RXRBP28702 RWDD4P2-201ENST00000426392 563 ntBASIC7.08□□□□□ -1.28
RXRBP28702 AC010975.2-201ENST00000427781 588 ntBASIC7.08□□□□□ -1.28
RXRBP28702 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.08□□□□□ -1.28
RXRBP28702 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.08□□□□□ -1.28
RXRBP28702 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC7.08□□□□□ -1.28
RXRBP28702 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RXRBP28702 MTCYBP34-201ENST00000439552 670 ntBASIC7.08□□□□□ -1.28
RXRBP28702 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC7.08□□□□□ -1.28
RXRBP28702 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC7.08□□□□□ -1.28
RXRBP28702 AC023271.1-201ENST00000445936 1090 ntBASIC7.08□□□□□ -1.28
RXRBP28702 TPMTP4-201ENST00000450749 678 ntBASIC7.08□□□□□ -1.28
RXRBP28702 AC023424.1-201ENST00000496058 459 ntBASIC7.08□□□□□ -1.28
RXRBP28702 RPSAP51-201ENST00000497462 645 ntBASIC7.08□□□□□ -1.28
RXRBP28702 MTATP6P22-201ENST00000507369 598 ntBASIC7.08□□□□□ -1.28
RXRBP28702 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC7.08□□□□□ -1.28
RXRBP28702 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.08□□□□□ -1.28
RXRBP28702 AP001646.1-201ENST00000527936 915 ntBASIC7.08□□□□□ -1.28
RXRBP28702 OR5BC1P-201ENST00000529327 739 ntBASIC7.08□□□□□ -1.28
RXRBP28702 AC104383.1-201ENST00000530297 370 ntBASIC7.08□□□□□ -1.28
RXRBP28702 YWHABP2-201ENST00000540201 713 ntBASIC7.08□□□□□ -1.28
RXRBP28702 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.08□□□□□ -1.28
RXRBP28702 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC7.08□□□□□ -1.28
RXRBP28702 OR4H6P-201ENST00000563771 921 ntBASIC7.08□□□□□ -1.28
RXRBP28702 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC7.08□□□□□ -1.28
RXRBP28702 TPRKBP2-201ENST00000565969 475 ntBASIC7.08□□□□□ -1.28
RXRBP28702 ANKRD36BP2-206ENST00000575193 1245 ntBASIC7.08□□□□□ -1.28
RXRBP28702 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC7.08□□□□□ -1.28
RXRBP28702 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC7.08□□□□□ -1.28
RXRBP28702 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC7.08□□□□□ -1.28
RXRBP28702 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC7.08□□□□□ -1.28
RXRBP28702 AC018618.2-201ENST00000604770 446 ntBASIC7.08□□□□□ -1.28
RXRBP28702 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.08□□□□□ -1.28
RXRBP28702 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RXRBP28702 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RXRBP28702 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RXRBP28702 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
RXRBP28702 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RXRBP28702 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.08□□□□□ -1.28
RXRBP28702 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RXRBP28702 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RXRBP28702 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms