Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.25□□□□□ -1.57
BDNFP23560 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.25□□□□□ -1.57
BDNFP23560 MORF4L1P3-201ENST00000525966 950 ntBASIC5.25□□□□□ -1.57
BDNFP23560 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.25□□□□□ -1.57
BDNFP23560 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.25□□□□□ -1.57
BDNFP23560 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.25□□□□□ -1.57
BDNFP23560 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.25□□□□□ -1.57
BDNFP23560 ADAD1P2-201ENST00000588476 646 ntBASIC5.25□□□□□ -1.57
BDNFP23560 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
BDNFP23560 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.25□□□□□ -1.57
BDNFP23560 IMMP1LP1-201ENST00000605170 488 ntBASIC5.25□□□□□ -1.57
BDNFP23560 RNA5SP108-201ENST00000605921 117 ntBASIC5.25□□□□□ -1.57
BDNFP23560 AP001521.2-201ENST00000608772 546 ntBASIC5.25□□□□□ -1.57
BDNFP23560 AC004943.3-201ENST00000624116 600 ntBASIC5.25□□□□□ -1.57
BDNFP23560 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BDNFP23560 AC073055.1-201ENST00000456901 1621 ntBASIC5.25□□□□□ -1.57
BDNFP23560 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.25□□□□□ -1.57
BDNFP23560 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BDNFP23560 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BDNFP23560 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.25□□□□□ -1.57
BDNFP23560 ECM1P2-201ENST00000503354 1577 ntBASIC5.25□□□□□ -1.57
BDNFP23560 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
BDNFP23560 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BDNFP23560 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BDNFP23560 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BDNFP23560 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
BDNFP23560 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BDNFP23560 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
BDNFP23560 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
BDNFP23560 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BDNFP23560 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.24□□□□□ -1.57
BDNFP23560 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BDNFP23560 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
BDNFP23560 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
BDNFP23560 RN7SKP44-201ENST00000363602 316 ntBASIC5.24□□□□□ -1.57
BDNFP23560 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
BDNFP23560 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BDNFP23560 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.24□□□□□ -1.57
BDNFP23560 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.24□□□□□ -1.57
BDNFP23560 AL390879.2-203ENST00000426943 1121 ntBASIC5.24□□□□□ -1.57
BDNFP23560 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.24□□□□□ -1.57
BDNFP23560 MOB1AP2-201ENST00000446060 614 ntBASIC5.24□□□□□ -1.57
BDNFP23560 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.24□□□□□ -1.57
BDNFP23560 AC009963.2-201ENST00000453431 138 ntBASIC5.24□□□□□ -1.57
BDNFP23560 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.24□□□□□ -1.57
BDNFP23560 AC018635.1-201ENST00000468292 1030 ntBASIC5.24□□□□□ -1.57
BDNFP23560 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.24□□□□□ -1.57
BDNFP23560 GAPDHP56-201ENST00000506031 988 ntBASIC5.24□□□□□ -1.57
BDNFP23560 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.24□□□□□ -1.57
BDNFP23560 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.24□□□□□ -1.57
BDNFP23560 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.24□□□□□ -1.57
BDNFP23560 AC022882.1-201ENST00000532142 501 ntBASIC5.24□□□□□ -1.57
BDNFP23560 AL136520.1-202ENST00000555494 763 ntBASIC5.24□□□□□ -1.57
BDNFP23560 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.24□□□□□ -1.57
BDNFP23560 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.24□□□□□ -1.57
BDNFP23560 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.24□□□□□ -1.57
BDNFP23560 AC018695.5-201ENST00000605872 315 ntBASIC5.24□□□□□ -1.57
BDNFP23560 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.24□□□□□ -1.57
BDNFP23560 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
BDNFP23560 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
BDNFP23560 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
BDNFP23560 AL132640.2-201ENST00000559968 1698 ntBASIC5.24□□□□□ -1.57
BDNFP23560 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
BDNFP23560 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
BDNFP23560 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
BDNFP23560 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BDNFP23560 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.23□□□□□ -1.57
BDNFP23560 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BDNFP23560 RNA5SP239-201ENST00000410218 129 ntBASIC5.23□□□□□ -1.57
BDNFP23560 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.23□□□□□ -1.57
BDNFP23560 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.23□□□□□ -1.57
BDNFP23560 GTF2IP5-201ENST00000414608 731 ntBASIC5.23□□□□□ -1.57
BDNFP23560 COX5BP7-201ENST00000414780 274 ntBASIC5.23□□□□□ -1.57
BDNFP23560 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.23□□□□□ -1.57
BDNFP23560 RPS15AP40-201ENST00000419621 391 ntBASIC5.23□□□□□ -1.57
BDNFP23560 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.23□□□□□ -1.57
BDNFP23560 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
BDNFP23560 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.23□□□□□ -1.57
BDNFP23560 AC093414.1-201ENST00000434712 514 ntBASIC5.23□□□□□ -1.57
BDNFP23560 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.23□□□□□ -1.57
BDNFP23560 DNAJC19P8-201ENST00000452887 259 ntBASIC5.23□□□□□ -1.57
BDNFP23560 AC008379.1-201ENST00000463655 464 ntBASIC5.23□□□□□ -1.57
BDNFP23560 AC063943.1-201ENST00000465434 453 ntBASIC5.23□□□□□ -1.57
BDNFP23560 AC073522.1-201ENST00000483312 377 ntBASIC5.23□□□□□ -1.57
BDNFP23560 IGLV2-34-201ENST00000490007 283 ntBASIC5.23□□□□□ -1.57
BDNFP23560 RPS23P1-201ENST00000491662 432 ntBASIC5.23□□□□□ -1.57
BDNFP23560 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
BDNFP23560 OR7H2P-201ENST00000513483 306 ntBASIC5.23□□□□□ -1.57
BDNFP23560 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.23□□□□□ -1.57
BDNFP23560 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.23□□□□□ -1.57
BDNFP23560 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.23□□□□□ -1.57
BDNFP23560 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.23□□□□□ -1.57
BDNFP23560 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
BDNFP23560 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.23□□□□□ -1.57
BDNFP23560 AC011611.5-201ENST00000552477 578 ntBASIC5.23□□□□□ -1.57
BDNFP23560 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.23□□□□□ -1.57
BDNFP23560 BGLT3-201ENST00000564523 994 ntBASIC5.23□□□□□ -1.57
BDNFP23560 TVP23CP2-201ENST00000571473 623 ntBASIC5.23□□□□□ -1.57
BDNFP23560 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.23□□□□□ -1.57
BDNFP23560 AC020910.3-201ENST00000603701 874 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms