Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC023141.6-201ENST00000429418 337 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 TRIM60P13-201ENST00000432350 1283 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.42□□□□□ -1.7
XRCC1P18887 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.42□□□□□ -1.7
XRCC1P18887 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.42□□□□□ -1.7
XRCC1P18887 PSMC1P13-201ENST00000458195 985 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 RN7SL860P-201ENST00000473738 223 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 RN7SL809P-201ENST00000482040 297 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.42□□□□□ -1.7
XRCC1P18887 HPRT1P1-201ENST00000509498 657 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 HMGB1P47-201ENST00000511281 589 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 AC015795.1-201ENST00000513669 327 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
XRCC1P18887 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.42□□□□□ -1.7
XRCC1P18887 AC068831.4-201ENST00000556118 109 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 AC012414.2-201ENST00000559474 187 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
XRCC1P18887 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
XRCC1P18887 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
XRCC1P18887 HMGB2P1-201ENST00000591146 634 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.42□□□□□ -1.7
XRCC1P18887 AC068020.1-201ENST00000594215 661 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.42□□□□□ -1.7
XRCC1P18887 AC012467.1-201ENST00000607740 256 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 MIR6810-201ENST00000622701 70 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 LINC01808-202ENST00000641680 1116 ntBASIC4.42□□□□□ -1.7
XRCC1P18887 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
XRCC1P18887 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
XRCC1P18887 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
XRCC1P18887 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
XRCC1P18887 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.41□□□□□ -1.7
XRCC1P18887 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
XRCC1P18887 HSPA8P17-201ENST00000427029 1382 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
XRCC1P18887 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
XRCC1P18887 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
XRCC1P18887 CPHL1P-201ENST00000461341 3407 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
XRCC1P18887 AC126755.2-208ENST00000327792 462 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 AC138969.1-213ENST00000331436 462 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 RPL23AP59-201ENST00000399415 461 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 EIF4A1P3-201ENST00000411521 244 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.41□□□□□ -1.7
XRCC1P18887 RAD23BP1-201ENST00000421404 1227 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 AL592293.2-201ENST00000422292 996 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 RPL12P34-201ENST00000424532 479 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.41□□□□□ -1.7
XRCC1P18887 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.41□□□□□ -1.7
XRCC1P18887 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.41□□□□□ -1.7
XRCC1P18887 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.41□□□□□ -1.7
XRCC1P18887 AP002345.1-201ENST00000456493 928 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 RPL5P30-201ENST00000465511 891 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 AC025674.1-201ENST00000507074 324 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 AC021146.7-201ENST00000509604 775 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
XRCC1P18887 FABP5P6-201ENST00000510588 409 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.41□□□□□ -1.7
XRCC1P18887 RNA5SP154-201ENST00000516193 111 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
XRCC1P18887 AC069240.1-201ENST00000548774 375 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
XRCC1P18887 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.41□□□□□ -1.7
XRCC1P18887 ADAD1P2-201ENST00000588476 646 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.41□□□□□ -1.7
XRCC1P18887 AC135803.1-201ENST00000608748 565 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.41□□□□□ -1.7
XRCC1P18887 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
XRCC1P18887 LINC00216-201ENST00000623548 1126 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 RPL23AP61-201ENST00000623642 466 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
XRCC1P18887 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
XRCC1P18887 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.41□□□□□ -1.7
XRCC1P18887 KPNA2P2-201ENST00000419546 1489 ntBASIC4.41□□□□□ -1.7
XRCC1P18887 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
XRCC1P18887 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
XRCC1P18887 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
XRCC1P18887 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
XRCC1P18887 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.41□□□□□ -1.7
XRCC1P18887 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
XRCC1P18887 LINC00622-201ENST00000562811 1570 ntBASIC4.4□□□□□ -1.7
XRCC1P18887 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
XRCC1P18887 AC016588.2-201ENST00000632484 3021 ntBASIC4.4□□□□□ -1.71
XRCC1P18887 OR10J6P-201ENST00000289731 930 ntBASIC4.4□□□□□ -1.71
XRCC1P18887 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
XRCC1P18887 IGKV7-3-201ENST00000357453 298 ntBASIC4.4□□□□□ -1.71
XRCC1P18887 MIR448-201ENST00000362131 111 ntBASIC4.4□□□□□ -1.71
XRCC1P18887 RNA5SP22-201ENST00000365393 109 ntBASIC4.4□□□□□ -1.71
XRCC1P18887 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
XRCC1P18887 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
XRCC1P18887 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.4□□□□□ -1.71
XRCC1P18887 RAB28P1-201ENST00000411517 641 ntBASIC4.4□□□□□ -1.71
XRCC1P18887 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
XRCC1P18887 COX6CP17-201ENST00000421389 185 ntBASIC4.4□□□□□ -1.71
XRCC1P18887 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
XRCC1P18887 AC022022.1-201ENST00000430304 178 ntBASIC4.4□□□□□ -1.71
XRCC1P18887 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.4□□□□□ -1.71
XRCC1P18887 GEMIN8P3-201ENST00000445417 720 ntBASIC4.4□□□□□ -1.71
XRCC1P18887 RPL23AP43-201ENST00000446445 471 ntBASIC4.4□□□□□ -1.71
XRCC1P18887 AL035551.1-201ENST00000446931 348 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms