Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
PCNAP12004 AL691482.1-201ENST00000453255 87 ntBASIC4.84□□□□□ -1.63
PCNAP12004 RPL6P9-201ENST00000466502 859 ntBASIC4.84□□□□□ -1.63
PCNAP12004 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.84□□□□□ -1.63
PCNAP12004 RN7SL222P-201ENST00000476452 299 ntBASIC4.84□□□□□ -1.63
PCNAP12004 MTCO3P35-201ENST00000485582 781 ntBASIC4.84□□□□□ -1.63
PCNAP12004 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.84□□□□□ -1.63
PCNAP12004 RN7SL441P-201ENST00000492388 296 ntBASIC4.84□□□□□ -1.63
PCNAP12004 AC111193.1-201ENST00000504097 155 ntBASIC4.84□□□□□ -1.63
PCNAP12004 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.84□□□□□ -1.63
PCNAP12004 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.84□□□□□ -1.63
PCNAP12004 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.84□□□□□ -1.63
PCNAP12004 Y_RNA.717-201ENST00000517106 92 ntBASIC4.84□□□□□ -1.63
PCNAP12004 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.84□□□□□ -1.63
PCNAP12004 AP002812.4-201ENST00000532139 286 ntBASIC4.84□□□□□ -1.63
PCNAP12004 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.84□□□□□ -1.63
PCNAP12004 AC068446.3-201ENST00000555285 382 ntBASIC4.84□□□□□ -1.63
PCNAP12004 AC027104.1-201ENST00000563702 681 ntBASIC4.84□□□□□ -1.63
PCNAP12004 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCNAP12004 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.84□□□□□ -1.63
PCNAP12004 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.84□□□□□ -1.63
PCNAP12004 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCNAP12004 AC125494.3-201ENST00000602759 455 ntBASIC4.84□□□□□ -1.63
PCNAP12004 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCNAP12004 MIR6862-1-201ENST00000613016 70 ntBASIC4.84□□□□□ -1.63
PCNAP12004 MIR6862-2-201ENST00000614755 70 ntBASIC4.84□□□□□ -1.63
PCNAP12004 AC140725.3-201ENST00000616193 880 ntBASIC4.84□□□□□ -1.63
PCNAP12004 STMN1P1-201ENST00000617809 440 ntBASIC4.84□□□□□ -1.63
PCNAP12004 AL035461.2-201ENST00000619201 524 ntBASIC4.84□□□□□ -1.63
PCNAP12004 AC006386.1-201ENST00000619436 415 ntBASIC4.84□□□□□ -1.63
PCNAP12004 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.84□□□□□ -1.63
PCNAP12004 AL121594.5-201ENST00000631724 573 ntBASIC4.84□□□□□ -1.63
PCNAP12004 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
PCNAP12004 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PCNAP12004 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PCNAP12004 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PCNAP12004 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PCNAP12004 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCNAP12004 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCNAP12004 AC092079.1-201ENST00000558620 1985 ntBASIC4.84□□□□□ -1.64
PCNAP12004 RNF6P1-201ENST00000444889 1784 ntBASIC4.83□□□□□ -1.64
PCNAP12004 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCNAP12004 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
PCNAP12004 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCNAP12004 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.83□□□□□ -1.64
PCNAP12004 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PCNAP12004 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCNAP12004 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
PCNAP12004 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCNAP12004 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.83□□□□□ -1.64
PCNAP12004 RNU6-353P-201ENST00000364266 108 ntBASIC4.83□□□□□ -1.64
PCNAP12004 RNA5SP455-201ENST00000365190 119 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC005522.1-201ENST00000395416 346 ntBASIC4.83□□□□□ -1.64
PCNAP12004 HSPD1P16-201ENST00000402302 394 ntBASIC4.83□□□□□ -1.64
PCNAP12004 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.83□□□□□ -1.64
PCNAP12004 MTATP6P20-201ENST00000414147 562 ntBASIC4.83□□□□□ -1.64
PCNAP12004 GAPDHP49-201ENST00000421421 961 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC099336.2-201ENST00000422457 254 ntBASIC4.83□□□□□ -1.64
PCNAP12004 RPS26P47-201ENST00000427219 348 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.83□□□□□ -1.64
PCNAP12004 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.83□□□□□ -1.64
PCNAP12004 CDY14P-201ENST00000431260 1014 ntBASIC4.83□□□□□ -1.64
PCNAP12004 MTND2P5-201ENST00000432656 1006 ntBASIC4.83□□□□□ -1.64
PCNAP12004 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.83□□□□□ -1.64
PCNAP12004 RPS20P1-201ENST00000434853 354 ntBASIC4.83□□□□□ -1.64
PCNAP12004 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.83□□□□□ -1.64
PCNAP12004 HMGB1P45-201ENST00000435986 653 ntBASIC4.83□□□□□ -1.64
PCNAP12004 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.83□□□□□ -1.64
PCNAP12004 CDY12P-201ENST00000440679 1015 ntBASIC4.83□□□□□ -1.64
PCNAP12004 CDY13P-201ENST00000445813 1015 ntBASIC4.83□□□□□ -1.64
PCNAP12004 CASP3P1-201ENST00000446037 609 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC068135.1-201ENST00000446164 246 ntBASIC4.83□□□□□ -1.64
PCNAP12004 EIF2S2P2-201ENST00000447161 982 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AL354714.3-201ENST00000447284 493 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AL050341.1-201ENST00000447743 313 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.83□□□□□ -1.64
PCNAP12004 TCEA1P1-201ENST00000449716 880 ntBASIC4.83□□□□□ -1.64
PCNAP12004 CDY23P-201ENST00000451661 1014 ntBASIC4.83□□□□□ -1.64
PCNAP12004 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.83□□□□□ -1.64
PCNAP12004 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.83□□□□□ -1.64
PCNAP12004 AC099560.2-201ENST00000457554 255 ntBASIC4.83□□□□□ -1.64
PCNAP12004 CCDC75P1-201ENST00000469247 791 ntBASIC4.83□□□□□ -1.64
PCNAP12004 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.83□□□□□ -1.64
PCNAP12004 RN7SL214P-201ENST00000487317 265 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC023050.1-201ENST00000498198 304 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.83□□□□□ -1.64
PCNAP12004 AC113430.1-201ENST00000506872 718 ntBASIC4.83□□□□□ -1.64
PCNAP12004 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCNAP12004 AC008565.1-201ENST00000509046 885 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC008837.1-201ENST00000511513 412 ntBASIC4.83□□□□□ -1.64
PCNAP12004 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.83□□□□□ -1.64
PCNAP12004 HMGB1P23-201ENST00000518743 568 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC104417.1-201ENST00000523974 751 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC012339.2-201ENST00000523996 453 ntBASIC4.83□□□□□ -1.64
PCNAP12004 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCNAP12004 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.83□□□□□ -1.64
PCNAP12004 AC095057.3-201ENST00000567102 1157 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AC027455.1-201ENST00000574104 594 ntBASIC4.83□□□□□ -1.64
PCNAP12004 AP005119.2-201ENST00000579735 1105 ntBASIC4.83□□□□□ -1.64
PCNAP12004 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms