Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 FP325313.1-201ENST00000638228 703 ntBASIC4.79□□□□□ -1.64
VTNP04004 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.79□□□□□ -1.64
VTNP04004 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTNP04004 AC006971.1-201ENST00000407916 4486 ntBASIC4.79□□□□□ -1.64
VTNP04004 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTNP04004 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTNP04004 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
VTNP04004 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VTNP04004 AC093591.2-201ENST00000565254 3843 ntBASIC4.79□□□□□ -1.64
VTNP04004 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.79□□□□□ -1.64
VTNP04004 AL512283.1-201ENST00000606756 1384 ntBASIC4.78□□□□□ -1.64
VTNP04004 RLIMP2-201ENST00000427891 1563 ntBASIC4.78□□□□□ -1.64
VTNP04004 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.78□□□□□ -1.64
VTNP04004 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.78□□□□□ -1.64
VTNP04004 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VTNP04004 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VTNP04004 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
VTNP04004 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VTNP04004 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VTNP04004 RN7SKP74-201ENST00000362849 309 ntBASIC4.78□□□□□ -1.64
VTNP04004 RNU6-1251P-201ENST00000364502 107 ntBASIC4.78□□□□□ -1.64
VTNP04004 RNU6-40P-201ENST00000384254 107 ntBASIC4.78□□□□□ -1.64
VTNP04004 RPS27AP11-201ENST00000402798 447 ntBASIC4.78□□□□□ -1.64
VTNP04004 SNORA11-201ENST00000408789 128 ntBASIC4.78□□□□□ -1.64
VTNP04004 RNA5SP317-201ENST00000410176 116 ntBASIC4.78□□□□□ -1.64
VTNP04004 RNA5SP311-201ENST00000411290 116 ntBASIC4.78□□□□□ -1.64
VTNP04004 RPL6P29-201ENST00000414863 865 ntBASIC4.78□□□□□ -1.64
VTNP04004 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.78□□□□□ -1.64
VTNP04004 AC062016.2-201ENST00000420950 676 ntBASIC4.78□□□□□ -1.64
VTNP04004 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.78□□□□□ -1.64
VTNP04004 AC074367.1-201ENST00000438685 1125 ntBASIC4.78□□□□□ -1.64
VTNP04004 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.78□□□□□ -1.64
VTNP04004 AC114755.5-201ENST00000447760 831 ntBASIC4.78□□□□□ -1.64
VTNP04004 AL157884.3-201ENST00000448273 1184 ntBASIC4.78□□□□□ -1.64
VTNP04004 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.78□□□□□ -1.64
VTNP04004 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VTNP04004 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.78□□□□□ -1.64
VTNP04004 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VTNP04004 RNA5SP315-201ENST00000516340 116 ntBASIC4.78□□□□□ -1.64
VTNP04004 RNA5SP519-201ENST00000516480 119 ntBASIC4.78□□□□□ -1.64
VTNP04004 RNA5SP312-201ENST00000517068 116 ntBASIC4.78□□□□□ -1.64
VTNP04004 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.78□□□□□ -1.64
VTNP04004 AC084824.1-201ENST00000550917 1005 ntBASIC4.78□□□□□ -1.64
VTNP04004 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.78□□□□□ -1.64
VTNP04004 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.78□□□□□ -1.64
VTNP04004 MIR3936-201ENST00000584304 110 ntBASIC4.78□□□□□ -1.64
VTNP04004 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.78□□□□□ -1.64
VTNP04004 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.78□□□□□ -1.64
VTNP04004 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.78□□□□□ -1.64
VTNP04004 HMGB2P1-201ENST00000591146 634 ntBASIC4.78□□□□□ -1.64
VTNP04004 AL450270.1-201ENST00000606160 391 ntBASIC4.78□□□□□ -1.64
VTNP04004 AC025175.1-201ENST00000606482 759 ntBASIC4.78□□□□□ -1.64
VTNP04004 Z98200.1-201ENST00000607298 470 ntBASIC4.78□□□□□ -1.64
VTNP04004 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.78□□□□□ -1.64
VTNP04004 AC016542.1-201ENST00000608259 493 ntBASIC4.78□□□□□ -1.64
VTNP04004 AC004241.3-201ENST00000611728 517 ntBASIC4.78□□□□□ -1.64
VTNP04004 AL021997.2-201ENST00000615674 271 ntBASIC4.78□□□□□ -1.64
VTNP04004 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.78□□□□□ -1.64
VTNP04004 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VTNP04004 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VTNP04004 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VTNP04004 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VTNP04004 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.78□□□□□ -1.64
VTNP04004 AC097063.1-201ENST00000426714 1797 ntBASIC4.78□□□□□ -1.64
VTNP04004 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.78□□□□□ -1.64
VTNP04004 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VTNP04004 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
VTNP04004 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VTNP04004 HSPD1P14-201ENST00000432666 1618 ntBASIC4.77□□□□□ -1.65
VTNP04004 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VTNP04004 RNA5SP175-201ENST00000364275 119 ntBASIC4.77□□□□□ -1.65
VTNP04004 RN7SKP263-201ENST00000411194 309 ntBASIC4.77□□□□□ -1.65
VTNP04004 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.77□□□□□ -1.65
VTNP04004 RPL17P36-201ENST00000420302 549 ntBASIC4.77□□□□□ -1.65
VTNP04004 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.77□□□□□ -1.65
VTNP04004 MTND4LP13-201ENST00000425022 298 ntBASIC4.77□□□□□ -1.65
VTNP04004 RPS6P14-201ENST00000425165 719 ntBASIC4.77□□□□□ -1.65
VTNP04004 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.77□□□□□ -1.65
VTNP04004 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.77□□□□□ -1.65
VTNP04004 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.77□□□□□ -1.65
VTNP04004 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.77□□□□□ -1.65
VTNP04004 LARP7P4-201ENST00000481075 878 ntBASIC4.77□□□□□ -1.65
VTNP04004 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.77□□□□□ -1.65
VTNP04004 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VTNP04004 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.77□□□□□ -1.65
VTNP04004 AP000859.1-201ENST00000525536 307 ntBASIC4.77□□□□□ -1.65
VTNP04004 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.77□□□□□ -1.65
VTNP04004 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.77□□□□□ -1.65
VTNP04004 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.77□□□□□ -1.65
VTNP04004 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.77□□□□□ -1.65
VTNP04004 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.77□□□□□ -1.65
VTNP04004 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VTNP04004 AC010201.1-201ENST00000605051 540 ntBASIC4.77□□□□□ -1.65
VTNP04004 AC092953.2-201ENST00000608000 699 ntBASIC4.77□□□□□ -1.65
VTNP04004 AL135786.2-201ENST00000608422 615 ntBASIC4.77□□□□□ -1.65
VTNP04004 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.77□□□□□ -1.65
VTNP04004 AC084824.5-201ENST00000612009 413 ntBASIC4.77□□□□□ -1.65
VTNP04004 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
VTNP04004 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.77□□□□□ -1.65
VTNP04004 AC074140.1-201ENST00000621617 208 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms