Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.26□□□□□ -1.73
MT-ND1P03886 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.26□□□□□ -1.73
MT-ND1P03886 CABYRP1-201ENST00000465493 1045 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.26□□□□□ -1.73
MT-ND1P03886 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.26□□□□□ -1.73
MT-ND1P03886 AC147055.3-201ENST00000510547 851 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 BTF3P13-201ENST00000513224 490 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 MYL12AP1-201ENST00000518490 515 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MT-ND1P03886 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MT-ND1P03886 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.26□□□□□ -1.73
MT-ND1P03886 HMGN2P6-201ENST00000551091 273 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.26□□□□□ -1.73
MT-ND1P03886 HMGB3P26-201ENST00000560051 582 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 MIR4512-201ENST00000583257 77 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 AC008759.1-201ENST00000589783 983 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 HMGB2P1-201ENST00000591146 634 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.26□□□□□ -1.73
MT-ND1P03886 AC090181.2-201ENST00000602975 672 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 AL355816.1-201ENST00000607951 118 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 MIR6862-1-201ENST00000613016 70 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MT-ND1P03886 MIR6862-2-201ENST00000614755 70 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.26□□□□□ -1.73
MT-ND1P03886 AP004607.9-201ENST00000618202 316 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 AL445493.3-201ENST00000619568 477 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
MT-ND1P03886 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.26□□□□□ -1.73
MT-ND1P03886 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.26□□□□□ -1.73
MT-ND1P03886 AC135352.1-201ENST00000506173 1418 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 AC068254.2-201ENST00000623938 3577 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.26□□□□□ -1.73
MT-ND1P03886 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
MT-ND1P03886 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MT-ND1P03886 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.26□□□□□ -1.73
MT-ND1P03886 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MT-ND1P03886 NXPH1-205ENST00000602349 1953 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.25□□□□□ -1.73
MT-ND1P03886 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
MT-ND1P03886 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.25□□□□□ -1.73
MT-ND1P03886 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
MT-ND1P03886 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
MT-ND1P03886 RN7SKP115-201ENST00000363177 317 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 RNA5SP22-201ENST00000365393 109 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.25□□□□□ -1.73
MT-ND1P03886 RNU6-1176P-201ENST00000390955 107 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
MT-ND1P03886 LAP3P1-201ENST00000403648 294 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 RN7SKP229-201ENST00000410465 302 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 DPPA2P3-201ENST00000411853 655 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 AL160275.2-201ENST00000412010 394 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.25□□□□□ -1.73
MT-ND1P03886 AC007559.1-201ENST00000428736 355 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 CDY14P-201ENST00000431260 1014 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 CDY12P-201ENST00000440679 1015 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 CDY13P-201ENST00000445813 1015 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 AC108463.1-201ENST00000450258 347 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 OR52J1P-201ENST00000450596 932 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 TPMTP4-201ENST00000450749 678 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 CDY23P-201ENST00000451661 1014 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 HMGB3P21-201ENST00000452483 547 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.25□□□□□ -1.73
MT-ND1P03886 MTND2P6-201ENST00000455337 1030 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 OR52A4P-201ENST00000472867 958 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 AC004815.1-201ENST00000484185 331 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.25□□□□□ -1.73
MT-ND1P03886 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.25□□□□□ -1.73
MT-ND1P03886 AC027338.1-201ENST00000514840 825 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.25□□□□□ -1.73
MT-ND1P03886 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.25□□□□□ -1.73
MT-ND1P03886 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.25□□□□□ -1.73
MT-ND1P03886 AC019227.1-201ENST00000526902 510 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MT-ND1P03886 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MT-ND1P03886 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.25□□□□□ -1.73
MT-ND1P03886 NOP56P3-201ENST00000549457 385 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.25□□□□□ -1.73
MT-ND1P03886 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.25□□□□□ -1.73
MT-ND1P03886 AC106785.3-201ENST00000564064 847 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MT-ND1P03886 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.25□□□□□ -1.73
MT-ND1P03886 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.25□□□□□ -1.73
MT-ND1P03886 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.25□□□□□ -1.73
MT-ND1P03886 AL160290.3-201ENST00000604869 165 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 AC004775.1-201ENST00000607389 753 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MT-ND1P03886 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MT-ND1P03886 MIR6729-201ENST00000618194 65 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.25□□□□□ -1.73
MT-ND1P03886 OR2L1P-202ENST00000641567 1023 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 Z98755.1-201ENST00000407015 1384 ntBASIC4.25□□□□□ -1.73
MT-ND1P03886 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MT-ND1P03886 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MT-ND1P03886 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MT-ND1P03886 CIR1P2-201ENST00000514821 1342 ntBASIC4.24□□□□□ -1.73
MT-ND1P03886 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.24□□□□□ -1.73
MT-ND1P03886 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
MT-ND1P03886 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.24□□□□□ -1.73
MT-ND1P03886 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.24□□□□□ -1.73
MT-ND1P03886 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms