Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL603766.1-201ENST00000407763 664 ntBASIC4.49□□□□□ -1.69
APOEP02649 MIR1911-201ENST00000410783 80 ntBASIC4.49□□□□□ -1.69
APOEP02649 P2RY10P2-201ENST00000416730 913 ntBASIC4.49□□□□□ -1.69
APOEP02649 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.49□□□□□ -1.69
APOEP02649 CHIAP3-201ENST00000423668 1133 ntBASIC4.49□□□□□ -1.69
APOEP02649 RPEP2-201ENST00000432149 701 ntBASIC4.49□□□□□ -1.69
APOEP02649 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.49□□□□□ -1.69
APOEP02649 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.49□□□□□ -1.69
APOEP02649 AL512326.1-201ENST00000443050 721 ntBASIC4.49□□□□□ -1.69
APOEP02649 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.49□□□□□ -1.69
APOEP02649 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.49□□□□□ -1.69
APOEP02649 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.49□□□□□ -1.69
APOEP02649 RPS23P7-201ENST00000466210 444 ntBASIC4.49□□□□□ -1.69
APOEP02649 RPL35P6-201ENST00000490024 372 ntBASIC4.49□□□□□ -1.69
APOEP02649 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
APOEP02649 AC092593.2-201ENST00000513866 913 ntBASIC4.49□□□□□ -1.69
APOEP02649 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.49□□□□□ -1.69
APOEP02649 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.49□□□□□ -1.69
APOEP02649 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.49□□□□□ -1.69
APOEP02649 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.49□□□□□ -1.69
APOEP02649 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.49□□□□□ -1.69
APOEP02649 AC122134.1-201ENST00000565664 1104 ntBASIC4.49□□□□□ -1.69
APOEP02649 AC114781.5-201ENST00000615297 108 ntBASIC4.49□□□□□ -1.69
APOEP02649 AC006338.2-201ENST00000616864 791 ntBASIC4.49□□□□□ -1.69
APOEP02649 AP000843.1-201ENST00000624880 701 ntBASIC4.49□□□□□ -1.69
APOEP02649 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
APOEP02649 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
APOEP02649 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOEP02649 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.49□□□□□ -1.69
APOEP02649 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.49□□□□□ -1.69
APOEP02649 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
APOEP02649 AC093311.1-201ENST00000506586 2021 ntBASIC4.48□□□□□ -1.69
APOEP02649 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
APOEP02649 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.48□□□□□ -1.69
APOEP02649 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
APOEP02649 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.48□□□□□ -1.69
APOEP02649 AL158163.1-201ENST00000603915 1649 ntBASIC4.48□□□□□ -1.69
APOEP02649 AC126755.2-208ENST00000327792 462 ntBASIC4.48□□□□□ -1.69
APOEP02649 AC138969.1-213ENST00000331436 462 ntBASIC4.48□□□□□ -1.69
APOEP02649 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
APOEP02649 OR6C69P-201ENST00000394268 893 ntBASIC4.48□□□□□ -1.69
APOEP02649 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
APOEP02649 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.48□□□□□ -1.69
APOEP02649 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.48□□□□□ -1.69
APOEP02649 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.48□□□□□ -1.69
APOEP02649 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.48□□□□□ -1.69
APOEP02649 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
APOEP02649 UBE2V2P4-201ENST00000447495 259 ntBASIC4.48□□□□□ -1.69
APOEP02649 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.48□□□□□ -1.69
APOEP02649 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.48□□□□□ -1.69
APOEP02649 AC026979.1-201ENST00000492525 396 ntBASIC4.48□□□□□ -1.69
APOEP02649 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.48□□□□□ -1.69
APOEP02649 AL592156.1-201ENST00000508758 304 ntBASIC4.48□□□□□ -1.69
APOEP02649 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.48□□□□□ -1.69
APOEP02649 PARP4P3-201ENST00000510265 317 ntBASIC4.48□□□□□ -1.69
APOEP02649 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.48□□□□□ -1.69
APOEP02649 RN7SKP34-201ENST00000516142 244 ntBASIC4.48□□□□□ -1.69
APOEP02649 IGKV2D-10-201ENST00000520194 281 ntBASIC4.48□□□□□ -1.69
APOEP02649 AC138701.1-201ENST00000524329 714 ntBASIC4.48□□□□□ -1.69
APOEP02649 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.48□□□□□ -1.69
APOEP02649 CD24P2-201ENST00000565486 219 ntBASIC4.48□□□□□ -1.69
APOEP02649 KPNA2P3-201ENST00000584190 848 ntBASIC4.48□□□□□ -1.69
APOEP02649 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.48□□□□□ -1.69
APOEP02649 AC068790.5-201ENST00000602741 355 ntBASIC4.48□□□□□ -1.69
APOEP02649 AL354984.3-201ENST00000604803 325 ntBASIC4.48□□□□□ -1.69
APOEP02649 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
APOEP02649 MLECP1-201ENST00000615893 709 ntBASIC4.48□□□□□ -1.69
APOEP02649 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
APOEP02649 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.48□□□□□ -1.69
APOEP02649 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.48□□□□□ -1.69
APOEP02649 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
APOEP02649 AL356489.2-201ENST00000566968 3528 ntBASIC4.48□□□□□ -1.69
APOEP02649 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
APOEP02649 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
APOEP02649 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
APOEP02649 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
APOEP02649 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.47□□□□□ -1.69
APOEP02649 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
APOEP02649 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.47□□□□□ -1.69
APOEP02649 RPL23AP26-201ENST00000412728 464 ntBASIC4.47□□□□□ -1.69
APOEP02649 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.47□□□□□ -1.69
APOEP02649 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.47□□□□□ -1.69
APOEP02649 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.47□□□□□ -1.69
APOEP02649 AC106901.1-201ENST00000425086 698 ntBASIC4.47□□□□□ -1.69
APOEP02649 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.47□□□□□ -1.69
APOEP02649 AC009963.2-201ENST00000453431 138 ntBASIC4.47□□□□□ -1.69
APOEP02649 AC079804.1-201ENST00000461922 436 ntBASIC4.47□□□□□ -1.69
APOEP02649 RPL7P22-201ENST00000466005 733 ntBASIC4.47□□□□□ -1.69
APOEP02649 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.47□□□□□ -1.69
APOEP02649 UQCRHP4-201ENST00000471686 272 ntBASIC4.47□□□□□ -1.69
APOEP02649 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.47□□□□□ -1.69
APOEP02649 AC018797.3-201ENST00000513388 1241 ntBASIC4.47□□□□□ -1.69
APOEP02649 RNU6-943P-201ENST00000516960 98 ntBASIC4.47□□□□□ -1.69
APOEP02649 IGLVIV-53-201ENST00000520107 367 ntBASIC4.47□□□□□ -1.69
APOEP02649 AC090819.1-201ENST00000523800 1111 ntBASIC4.47□□□□□ -1.69
APOEP02649 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
APOEP02649 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
APOEP02649 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.47□□□□□ -1.69
APOEP02649 TVP23BP1-201ENST00000557500 617 ntBASIC4.47□□□□□ -1.69
APOEP02649 AC124068.1-201ENST00000563131 678 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms