Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFBP01127 AC019155.1-201ENST00000382242 574 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 CRYBB2P1-203ENST00000415709 538 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 AC008280.1-201ENST00000418851 412 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFBP01127 FAM204CP-201ENST00000424489 642 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 RPL7P2-201ENST00000427639 268 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFBP01127 MTND6P6-201ENST00000478031 263 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFBP01127 SEPT10P1-201ENST00000517342 1162 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFBP01127 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.69□□□□□ -1.66
PDGFBP01127 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFBP01127 AC068446.3-201ENST00000555285 382 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFBP01127 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.69□□□□□ -1.66
PDGFBP01127 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.69□□□□□ -1.66
PDGFBP01127 MIR3944-201ENST00000581277 108 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 AP005262.1-201ENST00000582646 997 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 MIR7853-201ENST00000584820 132 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.69□□□□□ -1.66
PDGFBP01127 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.69□□□□□ -1.66
PDGFBP01127 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.69□□□□□ -1.66
PDGFBP01127 BNIP3P11-201ENST00000603878 563 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 AC131238.1-201ENST00000617135 328 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 AC091953.5-201ENST00000622919 233 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 AC063976.2-201ENST00000425667 3556 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFBP01127 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.69□□□□□ -1.66
PDGFBP01127 AC104260.2-201ENST00000623551 3497 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
PDGFBP01127 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.69□□□□□ -1.66
PDGFBP01127 AC008079.2-201ENST00000623543 20396 ntBASIC4.69□□□□□ -1.66
PDGFBP01127 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFBP01127 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.69□□□□□ -1.66
PDGFBP01127 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.69□□□□□ -1.66
PDGFBP01127 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
PDGFBP01127 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFBP01127 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFBP01127 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFBP01127 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFBP01127 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFBP01127 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
PDGFBP01127 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.68□□□□□ -1.66
PDGFBP01127 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.68□□□□□ -1.66
PDGFBP01127 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFBP01127 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFBP01127 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.68□□□□□ -1.66
PDGFBP01127 SNORA70.6-201ENST00000383934 134 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 RPS27AP11-201ENST00000402798 447 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.68□□□□□ -1.66
PDGFBP01127 AC009965.2-201ENST00000425328 970 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 AL590623.1-201ENST00000427864 105 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 AL136231.1-201ENST00000429407 730 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 GOT2P5-201ENST00000433995 546 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.68□□□□□ -1.66
PDGFBP01127 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.68□□□□□ -1.66
PDGFBP01127 AL132838.2-201ENST00000492041 314 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 SUMO1P1-201ENST00000497904 306 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFBP01127 AC006499.6-201ENST00000511169 607 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 AC021193.1-201ENST00000511607 420 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 RNU6-513P-201ENST00000516104 104 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.68□□□□□ -1.66
PDGFBP01127 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFBP01127 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.68□□□□□ -1.66
PDGFBP01127 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.68□□□□□ -1.66
PDGFBP01127 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.68□□□□□ -1.66
PDGFBP01127 AL359219.2-201ENST00000555184 348 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.68□□□□□ -1.66
PDGFBP01127 AC022884.2-201ENST00000578535 580 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 AC069200.1-201ENST00000609511 323 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 AC016957.2-201ENST00000616998 848 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 MIR6133-201ENST00000617057 108 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.68□□□□□ -1.66
PDGFBP01127 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFBP01127 HPVC1-201ENST00000629899 1198 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PDGFBP01127 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.68□□□□□ -1.66
PDGFBP01127 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFBP01127 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFBP01127 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.68□□□□□ -1.66
PDGFBP01127 SMG1P4-204ENST00000523028 4131 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFBP01127 TCP1P3-201ENST00000414406 1498 ntBASIC4.68□□□□□ -1.66
PDGFBP01127 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFBP01127 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFBP01127 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFBP01127 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFBP01127 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFBP01127 AL022322.2-201ENST00000624072 20397 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.67□□□□□ -1.66
PDGFBP01127 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.67□□□□□ -1.66
PDGFBP01127 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.67□□□□□ -1.66
PDGFBP01127 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDGFBP01127 AC093311.1-201ENST00000506586 2021 ntBASIC4.67□□□□□ -1.66
PDGFBP01127 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PDGFBP01127 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
PDGFBP01127 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms