Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RN7SL354P-201ENST00000469282 294 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 RNA5SP249-201ENST00000516127 99 ntBASIC4.41□□□□□ -1.7
PRKNO60260 RN7SKP287-201ENST00000516546 266 ntBASIC4.41□□□□□ -1.7
PRKNO60260 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 AP006289.1-201ENST00000538089 277 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC011611.5-201ENST00000552477 578 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC063949.1-201ENST00000552900 865 ntBASIC4.41□□□□□ -1.7
PRKNO60260 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.41□□□□□ -1.7
PRKNO60260 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRKNO60260 AL390334.1-201ENST00000556395 450 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.41□□□□□ -1.7
PRKNO60260 MTND3P12-201ENST00000559068 328 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC105129.1-201ENST00000560250 297 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC122134.1-201ENST00000565664 1104 ntBASIC4.41□□□□□ -1.7
PRKNO60260 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 AC234772.3-201ENST00000602277 528 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC068790.7-201ENST00000602347 528 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC073091.2-201ENST00000603205 907 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AC079610.2-201ENST00000604818 690 ntBASIC4.41□□□□□ -1.7
PRKNO60260 AL365400.2-201ENST00000605604 902 ntBASIC4.41□□□□□ -1.7
PRKNO60260 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.41□□□□□ -1.7
PRKNO60260 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PRKNO60260 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.41□□□□□ -1.7
PRKNO60260 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PRKNO60260 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
PRKNO60260 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PRKNO60260 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PRKNO60260 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.41□□□□□ -1.7
PRKNO60260 SALL4P2-201ENST00000423288 2910 ntBASIC4.41□□□□□ -1.7
PRKNO60260 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRKNO60260 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRKNO60260 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRKNO60260 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.41□□□□□ -1.7
PRKNO60260 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.41□□□□□ -1.7
PRKNO60260 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRKNO60260 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRKNO60260 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRKNO60260 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRKNO60260 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PRKNO60260 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PRKNO60260 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRKNO60260 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
PRKNO60260 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRKNO60260 AC008549.2-201ENST00000333482 706 ntBASIC4.4□□□□□ -1.71
PRKNO60260 SNORA56-201ENST00000383966 129 ntBASIC4.4□□□□□ -1.71
PRKNO60260 AC233289.1-201ENST00000403700 508 ntBASIC4.4□□□□□ -1.71
PRKNO60260 ARL4AP5-201ENST00000404372 599 ntBASIC4.4□□□□□ -1.71
PRKNO60260 RN7SKP106-201ENST00000410832 272 ntBASIC4.4□□□□□ -1.71
PRKNO60260 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.4□□□□□ -1.71
PRKNO60260 LINC01347-201ENST00000417964 355 ntBASIC4.4□□□□□ -1.71
PRKNO60260 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.4□□□□□ -1.71
PRKNO60260 RPL23AP4-201ENST00000427757 463 ntBASIC4.4□□□□□ -1.71
PRKNO60260 ETF1P3-201ENST00000430422 1160 ntBASIC4.4□□□□□ -1.71
PRKNO60260 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.4□□□□□ -1.71
PRKNO60260 RPS29P22-201ENST00000472363 168 ntBASIC4.4□□□□□ -1.71
PRKNO60260 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.4□□□□□ -1.71
PRKNO60260 AC093752.1-206ENST00000511823 336 ntBASIC4.4□□□□□ -1.71
PRKNO60260 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.4□□□□□ -1.71
PRKNO60260 RPS27AP18-201ENST00000515536 459 ntBASIC4.4□□□□□ -1.71
PRKNO60260 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.4□□□□□ -1.71
PRKNO60260 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.4□□□□□ -1.71
PRKNO60260 AC138832.1-201ENST00000522871 556 ntBASIC4.4□□□□□ -1.71
PRKNO60260 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.4□□□□□ -1.71
PRKNO60260 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.4□□□□□ -1.71
PRKNO60260 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PRKNO60260 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.4□□□□□ -1.71
PRKNO60260 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.4□□□□□ -1.71
PRKNO60260 AL110118.1-201ENST00000553543 400 ntBASIC4.4□□□□□ -1.71
PRKNO60260 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.4□□□□□ -1.71
PRKNO60260 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PRKNO60260 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.4□□□□□ -1.71
PRKNO60260 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.4□□□□□ -1.71
PRKNO60260 DPRXP4-201ENST00000578053 568 ntBASIC4.4□□□□□ -1.71
PRKNO60260 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.4□□□□□ -1.71
PRKNO60260 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.4□□□□□ -1.71
PRKNO60260 AC010503.3-201ENST00000594355 540 ntBASIC4.4□□□□□ -1.71
PRKNO60260 VN1R87P-201ENST00000596706 487 ntBASIC4.4□□□□□ -1.71
PRKNO60260 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.4□□□□□ -1.71
PRKNO60260 AC106052.1-201ENST00000608029 497 ntBASIC4.4□□□□□ -1.71
PRKNO60260 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.4□□□□□ -1.71
PRKNO60260 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.4□□□□□ -1.71
PRKNO60260 MIR6748-201ENST00000610433 71 ntBASIC4.4□□□□□ -1.71
PRKNO60260 MIR6780A-201ENST00000615089 68 ntBASIC4.4□□□□□ -1.71
PRKNO60260 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PRKNO60260 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.4□□□□□ -1.71
PRKNO60260 SAMMSON-213ENST00000641336 1521 ntBASIC4.4□□□□□ -1.71
PRKNO60260 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PRKNO60260 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PRKNO60260 STX3-208ENST00000641815 3236 ntBASIC4.4□□□□□ -1.71
PRKNO60260 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PRKNO60260 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
PRKNO60260 AC017007.4-201ENST00000503353 1352 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms