Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MIR513A2-201ENST00000385249 127 ntBASIC3.92□□□□□ -1.78
SGCEO43556 ZNF603P-201ENST00000405613 487 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AMD1P2-201ENST00000412936 992 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AL450992.3-201ENST00000413192 568 ntBASIC3.92□□□□□ -1.78
SGCEO43556 UQCRBP1-201ENST00000421129 336 ntBASIC3.92□□□□□ -1.78
SGCEO43556 CENPIP1-201ENST00000425713 902 ntBASIC3.92□□□□□ -1.78
SGCEO43556 DPY19L1P2-201ENST00000426647 915 ntBASIC3.92□□□□□ -1.78
SGCEO43556 LYPLA1P1-201ENST00000434514 622 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AC073264.2-201ENST00000448886 166 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.92□□□□□ -1.78
SGCEO43556 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SGCEO43556 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SGCEO43556 DDX39BP2-208ENST00000453923 258 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AC231760.1-201ENST00000498002 260 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.92□□□□□ -1.78
SGCEO43556 AC010627.1-201ENST00000503819 1294 ntBASIC3.92□□□□□ -1.78
SGCEO43556 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.92□□□□□ -1.78
SGCEO43556 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.92□□□□□ -1.78
SGCEO43556 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.92□□□□□ -1.78
SGCEO43556 IGHV3-32-201ENST00000519182 355 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AC090151.1-201ENST00000520784 730 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.92□□□□□ -1.78
SGCEO43556 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.92□□□□□ -1.78
SGCEO43556 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.92□□□□□ -1.78
SGCEO43556 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.92□□□□□ -1.78
SGCEO43556 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.92□□□□□ -1.78
SGCEO43556 MIR4716-201ENST00000579628 84 ntBASIC3.92□□□□□ -1.78
SGCEO43556 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.92□□□□□ -1.78
SGCEO43556 MIR6780A-201ENST00000615089 68 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AC023509.5-201ENST00000617434 807 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AL133370.2-201ENST00000619934 439 ntBASIC3.92□□□□□ -1.78
SGCEO43556 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.92□□□□□ -1.78
SGCEO43556 AL049536.1-201ENST00000625043 744 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AC006065.6-201ENST00000625201 545 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.92□□□□□ -1.78
SGCEO43556 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.92□□□□□ -1.78
SGCEO43556 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SGCEO43556 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SGCEO43556 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SGCEO43556 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SGCEO43556 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.92□□□□□ -1.78
SGCEO43556 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SGCEO43556 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
SGCEO43556 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SGCEO43556 AL627171.1-201ENST00000618845 1308 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AC095050.2-201ENST00000510748 1458 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AC027287.1-201ENST00000553115 1453 ntBASIC3.92□□□□□ -1.78
SGCEO43556 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SGCEO43556 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SGCEO43556 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SGCEO43556 AC083899.2-201ENST00000423285 1376 ntBASIC3.91□□□□□ -1.78
SGCEO43556 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SGCEO43556 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
SGCEO43556 OR4K15-201ENST00000305051 1216 ntBASIC3.91□□□□□ -1.78
SGCEO43556 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SGCEO43556 RN7SKP44-201ENST00000363602 316 ntBASIC3.91□□□□□ -1.78
SGCEO43556 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SGCEO43556 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.91□□□□□ -1.78
SGCEO43556 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SGCEO43556 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.91□□□□□ -1.78
SGCEO43556 RN7SKP216-201ENST00000411050 312 ntBASIC3.91□□□□□ -1.78
SGCEO43556 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.91□□□□□ -1.78
SGCEO43556 AC073464.3-201ENST00000422564 712 ntBASIC3.91□□□□□ -1.78
SGCEO43556 NPM1P26-201ENST00000426339 738 ntBASIC3.91□□□□□ -1.78
SGCEO43556 AP001324.1-201ENST00000428553 399 ntBASIC3.91□□□□□ -1.78
SGCEO43556 AC073069.1-201ENST00000428657 441 ntBASIC3.91□□□□□ -1.78
SGCEO43556 YWHAEP5-201ENST00000431545 765 ntBASIC3.91□□□□□ -1.78
SGCEO43556 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SGCEO43556 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.91□□□□□ -1.78
SGCEO43556 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.91□□□□□ -1.78
SGCEO43556 RPL23AP43-201ENST00000446445 471 ntBASIC3.91□□□□□ -1.78
SGCEO43556 ARL2BPP10-201ENST00000446487 531 ntBASIC3.91□□□□□ -1.78
SGCEO43556 RPS27AP15-201ENST00000447672 466 ntBASIC3.91□□□□□ -1.78
SGCEO43556 CCRL1P1-201ENST00000449542 1053 ntBASIC3.91□□□□□ -1.78
SGCEO43556 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.91□□□□□ -1.78
SGCEO43556 EIF2S2P4-201ENST00000461070 984 ntBASIC3.91□□□□□ -1.78
SGCEO43556 RPS27AP17-201ENST00000463344 455 ntBASIC3.91□□□□□ -1.78
SGCEO43556 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.91□□□□□ -1.78
SGCEO43556 SYT14P1-201ENST00000481459 721 ntBASIC3.91□□□□□ -1.78
SGCEO43556 AC090013.1-201ENST00000485147 480 ntBASIC3.91□□□□□ -1.78
SGCEO43556 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.91□□□□□ -1.78
SGCEO43556 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.91□□□□□ -1.78
SGCEO43556 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.91□□□□□ -1.78
SGCEO43556 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.91□□□□□ -1.78
SGCEO43556 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SGCEO43556 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.91□□□□□ -1.78
SGCEO43556 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.91□□□□□ -1.78
SGCEO43556 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.91□□□□□ -1.78
SGCEO43556 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.91□□□□□ -1.78
SGCEO43556 AC008759.1-201ENST00000589783 983 ntBASIC3.91□□□□□ -1.78
SGCEO43556 AC007423.1-201ENST00000605009 627 ntBASIC3.91□□□□□ -1.78
SGCEO43556 AC110741.2-201ENST00000605278 268 ntBASIC3.91□□□□□ -1.78
SGCEO43556 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.91□□□□□ -1.78
SGCEO43556 AP005019.3-201ENST00000620418 560 ntBASIC3.91□□□□□ -1.78
SGCEO43556 AC103858.2-201ENST00000621471 543 ntBASIC3.91□□□□□ -1.78
SGCEO43556 MIR6730-201ENST00000622213 67 ntBASIC3.91□□□□□ -1.78
SGCEO43556 AC092159.4-201ENST00000624944 550 ntBASIC3.91□□□□□ -1.78
SGCEO43556 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SGCEO43556 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SGCEO43556 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms