Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.93□□□□□ -1.62
SMAD6O43541 AC027281.1-201ENST00000574178 758 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.93□□□□□ -1.62
SMAD6O43541 AL391358.1-201ENST00000605342 190 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
SMAD6O43541 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.93□□□□□ -1.62
SMAD6O43541 AC004232.3-201ENST00000622977 525 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 AL049536.1-201ENST00000625043 744 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.93□□□□□ -1.62
SMAD6O43541 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.93□□□□□ -1.62
SMAD6O43541 MIR3974-201ENST00000637126 96 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.93□□□□□ -1.62
SMAD6O43541 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.93□□□□□ -1.62
SMAD6O43541 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 AC104623.2-202ENST00000623477 4002 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.93□□□□□ -1.62
SMAD6O43541 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SMAD6O43541 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
SMAD6O43541 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.92□□□□□ -1.62
SMAD6O43541 HSPD1P11-201ENST00000508643 1702 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.92□□□□□ -1.62
SMAD6O43541 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.92□□□□□ -1.62
SMAD6O43541 SDAD1P1-202ENST00000524156 2051 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.92□□□□□ -1.62
SMAD6O43541 AC005005.4-201ENST00000623789 16698 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.92□□□□□ -1.62
SMAD6O43541 AC009643.2-201ENST00000603543 1448 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 RNU6-697P-201ENST00000363348 107 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AC019155.1-201ENST00000382242 574 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 RNU6-354P-201ENST00000383862 107 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 RNU6-610P-201ENST00000384264 107 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 SNORD116-1-201ENST00000384335 95 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SMAD6O43541 CYB5AP4-201ENST00000396692 399 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 AC119751.3-201ENST00000399720 670 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 CTSL3P-202ENST00000412179 788 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.92□□□□□ -1.62
SMAD6O43541 RSU1P3-201ENST00000412878 835 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 LIPT1P1-201ENST00000415870 1186 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.92□□□□□ -1.62
SMAD6O43541 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.92□□□□□ -1.62
SMAD6O43541 FO393414.1-201ENST00000428697 1184 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 USP9YP24-201ENST00000434374 697 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AL353597.2-202ENST00000434901 373 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 MTCYBP29-201ENST00000436327 1006 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 MED6P1-201ENST00000439659 713 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 CR769776.1-201ENST00000441254 787 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 OR10R1P-201ENST00000441524 1141 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 USP9YP17-201ENST00000444617 696 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AC092685.1-201ENST00000447960 1243 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 MRPL35P2-201ENST00000448009 511 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.92□□□□□ -1.62
SMAD6O43541 AC092155.2-201ENST00000454675 477 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 TPT1P1-201ENST00000458495 518 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 APOOP2-201ENST00000461561 539 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 NAP1L1P3-201ENST00000462291 880 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 CCDC75P1-201ENST00000469247 791 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 RPS23P1-201ENST00000491662 432 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.92□□□□□ -1.62
SMAD6O43541 MTCO1P31-201ENST00000506355 492 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 MTND4P2-201ENST00000507767 1203 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.92□□□□□ -1.62
SMAD6O43541 RN7SKP276-201ENST00000516242 268 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AC105031.1-201ENST00000518550 476 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.92□□□□□ -1.62
SMAD6O43541 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.92□□□□□ -1.62
SMAD6O43541 OR4V1P-201ENST00000525394 1140 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.92□□□□□ -1.62
SMAD6O43541 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.92□□□□□ -1.62
SMAD6O43541 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.92□□□□□ -1.62
SMAD6O43541 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.92□□□□□ -1.62
SMAD6O43541 AC091042.1-201ENST00000579213 173 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AC022726.1-201ENST00000587475 207 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.92□□□□□ -1.62
SMAD6O43541 AC119751.7-201ENST00000600494 245 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AC087283.1-201ENST00000604029 1074 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AC133552.5-201ENST00000604266 540 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.92□□□□□ -1.62
SMAD6O43541 FAM27B-201ENST00000610601 213 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 AC009704.2-201ENST00000618739 483 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 BX005214.3-202ENST00000619809 325 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AC021106.3-201ENST00000623925 531 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 BX649567.1-201ENST00000642071 1134 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SMAD6O43541 NCLP2-201ENST00000416078 1462 ntBASIC4.92□□□□□ -1.62
SMAD6O43541 AC090971.4-201ENST00000560291 1800 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms