Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.33□□□□□ -1.88
NACAE9PAV3 NDUFB4P12-201ENST00000513465 390 ntBASIC3.33□□□□□ -1.88
NACAE9PAV3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.33□□□□□ -1.88
NACAE9PAV3 NPM1P6-201ENST00000521088 871 ntBASIC3.33□□□□□ -1.88
NACAE9PAV3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.33□□□□□ -1.88
NACAE9PAV3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.33□□□□□ -1.88
NACAE9PAV3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NACAE9PAV3 BGLT3-201ENST00000564523 994 ntBASIC3.33□□□□□ -1.88
NACAE9PAV3 MIR4697-201ENST00000582977 78 ntBASIC3.33□□□□□ -1.88
NACAE9PAV3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.33□□□□□ -1.88
NACAE9PAV3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.33□□□□□ -1.88
NACAE9PAV3 BNIP3P40-201ENST00000596017 556 ntBASIC3.33□□□□□ -1.88
NACAE9PAV3 BNIP3P27-201ENST00000599991 412 ntBASIC3.33□□□□□ -1.88
NACAE9PAV3 BNIP3P31-201ENST00000604515 566 ntBASIC3.33□□□□□ -1.88
NACAE9PAV3 AC068831.8-201ENST00000620171 435 ntBASIC3.33□□□□□ -1.88
NACAE9PAV3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.33□□□□□ -1.88
NACAE9PAV3 AC097460.3-201ENST00000623099 442 ntBASIC3.33□□□□□ -1.88
NACAE9PAV3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.33□□□□□ -1.88
NACAE9PAV3 AC019080.5-201ENST00000624891 757 ntBASIC3.33□□□□□ -1.88
NACAE9PAV3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.33□□□□□ -1.88
NACAE9PAV3 OR10AB1P-202ENST00000641219 1686 ntBASIC3.33□□□□□ -1.88
NACAE9PAV3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NACAE9PAV3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.33□□□□□ -1.88
NACAE9PAV3 AC083899.2-201ENST00000423285 1376 ntBASIC3.33□□□□□ -1.88
NACAE9PAV3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NACAE9PAV3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NACAE9PAV3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NACAE9PAV3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
NACAE9PAV3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
NACAE9PAV3 RNA5SP151-201ENST00000365632 117 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 RNU6-1176P-201ENST00000390955 107 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NACAE9PAV3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.32□□□□□ -1.88
NACAE9PAV3 RNU2-50P-201ENST00000410494 143 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AL354692.1-201ENST00000423044 315 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.32□□□□□ -1.88
NACAE9PAV3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AL158053.1-201ENST00000441503 453 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 ARL2BPP10-201ENST00000446487 531 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.32□□□□□ -1.88
NACAE9PAV3 EIF2S2P4-201ENST00000461070 984 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 AC006463.2-201ENST00000473326 348 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 RPL12P20-201ENST00000475538 479 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.32□□□□□ -1.88
NACAE9PAV3 RNA5SP464-201ENST00000516251 108 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 AC067904.2-201ENST00000517322 1283 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.32□□□□□ -1.88
NACAE9PAV3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AC093014.1-201ENST00000548926 724 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AC096553.1-201ENST00000605169 829 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 AL731566.2-201ENST00000618971 317 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
NACAE9PAV3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NACAE9PAV3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NACAE9PAV3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NACAE9PAV3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NACAE9PAV3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.32□□□□□ -1.88
NACAE9PAV3 KARSP3-201ENST00000571212 1504 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NACAE9PAV3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NACAE9PAV3 AC139713.2-214ENST00000642059 1811 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 OR13C3-201ENST00000374781 1108 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 RNU6-398P-201ENST00000384143 109 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 BTF3P9-201ENST00000418784 283 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 RPS27AP7-201ENST00000422792 455 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 AC245028.1-201ENST00000423259 256 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 AC068287.1-201ENST00000430283 295 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 AL512637.2-201ENST00000431287 1256 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NACAE9PAV3 AC007000.2-201ENST00000442564 487 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.32□□□□□ -1.88
NACAE9PAV3 RPS23P7-201ENST00000466210 444 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 RPL23AP73-201ENST00000492507 471 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.32□□□□□ -1.88
NACAE9PAV3 HMGB1P3-201ENST00000502802 616 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NACAE9PAV3 RNU2-30P-201ENST00000516209 141 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.32□□□□□ -1.88
NACAE9PAV3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.32□□□□□ -1.88
NACAE9PAV3 OR5M2P-201ENST00000529003 936 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.32□□□□□ -1.88
NACAE9PAV3 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.32□□□□□ -1.88
NACAE9PAV3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NACAE9PAV3 AC022726.1-201ENST00000587475 207 ntBASIC3.32□□□□□ -1.88
NACAE9PAV3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.32□□□□□ -1.88
NACAE9PAV3 COX6CP4-201ENST00000605798 228 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms