Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
RGPD3A6NKT7 OR56B2P-201ENST00000317102 954 ntBASIC5.2□□□□□ -1.58
RGPD3A6NKT7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RGPD3A6NKT7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.2□□□□□ -1.58
RGPD3A6NKT7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.2□□□□□ -1.58
RGPD3A6NKT7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.2□□□□□ -1.58
RGPD3A6NKT7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.2□□□□□ -1.58
RGPD3A6NKT7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RGPD3A6NKT7 RN7SKP18-201ENST00000516005 275 ntBASIC5.2□□□□□ -1.58
RGPD3A6NKT7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.2□□□□□ -1.58
RGPD3A6NKT7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.2□□□□□ -1.58
RGPD3A6NKT7 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.2□□□□□ -1.58
RGPD3A6NKT7 AC022146.1-201ENST00000595307 847 ntBASIC5.2□□□□□ -1.58
RGPD3A6NKT7 AL137843.1-201ENST00000605078 385 ntBASIC5.2□□□□□ -1.58
RGPD3A6NKT7 MIR6868-201ENST00000611215 58 ntBASIC5.2□□□□□ -1.58
RGPD3A6NKT7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.2□□□□□ -1.58
RGPD3A6NKT7 AP001642.1-201ENST00000624727 2117 ntBASIC5.2□□□□□ -1.58
RGPD3A6NKT7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RGPD3A6NKT7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RGPD3A6NKT7 AL022393.1-201ENST00000625142 1677 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 TCEA1P2-201ENST00000420496 906 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AL158156.1-201ENST00000422509 473 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 RPS26P4-201ENST00000431743 355 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 HSPD1P21-201ENST00000436541 245 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AC024224.1-201ENST00000538284 609 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AC015726.1-201ENST00000602353 681 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AC005972.3-201ENST00000606304 481 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AL731532.2-201ENST00000623542 1953 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 RNA5SP399-201ENST00000364003 117 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AC236972.1-201ENST00000433225 199 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AL049873.1-201ENST00000480540 376 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 IMMP1LP1-201ENST00000605170 488 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 AC022106.2-201ENST00000620114 757 ntBASIC5.19□□□□□ -1.58
RGPD3A6NKT7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.19□□□□□ -1.58
RGPD3A6NKT7 MTCO1P12-201ENST00000414273 1543 ntBASIC5.18□□□□□ -1.58
RGPD3A6NKT7 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RGPD3A6NKT7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RGPD3A6NKT7 HMGB3P19-201ENST00000403971 560 ntBASIC5.18□□□□□ -1.58
RGPD3A6NKT7 UBTFL3-201ENST00000418934 1024 ntBASIC5.18□□□□□ -1.58
RGPD3A6NKT7 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.18□□□□□ -1.58
RGPD3A6NKT7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.18□□□□□ -1.58
RGPD3A6NKT7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.18□□□□□ -1.58
RGPD3A6NKT7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.18□□□□□ -1.58
RGPD3A6NKT7 UBTFL6-201ENST00000477929 1024 ntBASIC5.18□□□□□ -1.58
RGPD3A6NKT7 RPS3AP6-201ENST00000484430 795 ntBASIC5.18□□□□□ -1.58
RGPD3A6NKT7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.18□□□□□ -1.58
RGPD3A6NKT7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.18□□□□□ -1.58
RGPD3A6NKT7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.18□□□□□ -1.58
RGPD3A6NKT7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.18□□□□□ -1.58
RGPD3A6NKT7 AL031666.3-201ENST00000609320 1006 ntBASIC5.18□□□□□ -1.58
RGPD3A6NKT7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.18□□□□□ -1.58
RGPD3A6NKT7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.18□□□□□ -1.58
RGPD3A6NKT7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 MIR1911-201ENST00000410783 80 ntBASIC5.17□□□□□ -1.58
RGPD3A6NKT7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 RPS3AP46-201ENST00000448352 682 ntBASIC5.17□□□□□ -1.58
RGPD3A6NKT7 CYCSP53-201ENST00000455540 265 ntBASIC5.17□□□□□ -1.58
RGPD3A6NKT7 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 KRT19P6-201ENST00000510983 209 ntBASIC5.17□□□□□ -1.58
RGPD3A6NKT7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 AC093853.1-201ENST00000515689 483 ntBASIC5.17□□□□□ -1.58
RGPD3A6NKT7 RN7SKP289-201ENST00000517244 295 ntBASIC5.17□□□□□ -1.58
RGPD3A6NKT7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 MIR4513-201ENST00000581077 86 ntBASIC5.17□□□□□ -1.58
RGPD3A6NKT7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 AC097461.1-201ENST00000568928 2821 ntBASIC5.17□□□□□ -1.58
RGPD3A6NKT7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms