Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 AC023762.1-201ENST00000603280 584 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 AC015922.4-201ENST00000612568 690 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 AL590410.1-201ENST00000617925 333 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 AL669942.2-201ENST00000620352 697 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 MIR7154-201ENST00000620673 73 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 NXPH1-205ENST00000602349 1953 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 OR6C69P-201ENST00000394268 893 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 FCF1P5-201ENST00000406490 482 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AC092017.2-201ENST00000427600 362 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AP000936.3-201ENST00000438127 255 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 RPL7P32-201ENST00000457119 744 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 APOOP2-201ENST00000461561 539 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AC103987.1-201ENST00000473394 348 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AC012158.1-204ENST00000483430 465 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 IGBP1P5-201ENST00000507524 1000 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 PGBD4P4-201ENST00000509673 613 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 snoU109.6-201ENST00000516831 118 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 PSMB7P1-201ENST00000556349 514 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 FAM106CP-201ENST00000582212 507 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AC091178.1-203ENST00000584586 279 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 ARF4P1-201ENST00000605447 541 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AL353726.1-201ENST00000614041 1000 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AL158196.1-201ENST00000616786 434 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 AC090971.4-201ENST00000560291 1800 ntBASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP2Q9UDT6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 MFSD8-242ENST00000641690 4199 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 OR10J6P-201ENST00000289731 930 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 MIR3065-201ENST00000390137 79 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AL136131.1-201ENST00000406079 803 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 RN7SKP167-201ENST00000411047 285 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 RPS3AP54-201ENST00000435535 734 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 RPL7P33-201ENST00000444159 742 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 RPS26P28-201ENST00000470806 348 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AC117525.1-201ENST00000515228 503 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 RNA5SP497-201ENST00000516081 97 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 IGLV3-26-201ENST00000520756 302 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 MTND6P33-201ENST00000571794 183 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AL121834.1-201ENST00000572284 509 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AC069366.1-201ENST00000583159 838 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 HMGB2P1-201ENST00000591146 634 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AC090181.2-201ENST00000602975 672 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AC103792.1-201ENST00000603591 919 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AC008966.2-201ENST00000606157 453 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AC012557.1-201ENST00000607115 611 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 MIR6716-201ENST00000613413 80 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AC016717.3-201ENST00000624730 554 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 AL356317.1-201ENST00000396110 1436 ntBASIC5.19□□□□□ -1.58
CLIP2Q9UDT6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms