Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 OR52B1P-201ENST00000316506 909 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 SNORD116-9-201ENST00000384000 95 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 SNORD116-3-201ENST00000384287 95 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 SNORD116-7-201ENST00000384404 95 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 SNORD116-5-201ENST00000384462 95 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AL645927.1-201ENST00000396783 406 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 RN7SKP125-201ENST00000410481 302 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 RNU4-72P-201ENST00000410754 173 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 BTF3P8-201ENST00000414577 526 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 SEPT2P1-201ENST00000419651 180 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC005033.1-201ENST00000428904 813 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC073143.1-201ENST00000436316 395 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 PA2G4P6-201ENST00000438325 1197 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AL389915.2-201ENST00000454576 441 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC108161.1-201ENST00000461060 402 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 RPS24P16-201ENST00000497294 392 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 RPSAP51-201ENST00000497462 645 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC138938.1-201ENST00000515431 782 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 SEPT10P1-201ENST00000517342 1162 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC022360.1-201ENST00000521058 340 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 HMGB1P1-201ENST00000522557 636 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC022832.1-201ENST00000530718 645 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 HAUS8P1-201ENST00000549005 542 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC022662.1-201ENST00000580252 331 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 VIS1.1-201ENST00000610517 203 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 Mico1.1-201ENST00000611698 204 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AL450489.1-201ENST00000612071 468 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AL731566.2-201ENST00000618971 317 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC073569.3-201ENST00000619055 682 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC024023.1-201ENST00000624530 922 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 AC103706.2-201ENST00000638080 240 ntBASIC5.35□□□□□ -1.55
DKK3Q9UBP4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
DKK3Q9UBP4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AC107027.3-201ENST00000565095 3473 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AL034549.2-201ENST00000618285 3373 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 MTND4P10-201ENST00000446199 1363 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 DDX18P5-201ENST00000534547 1306 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 RNU6-549P-201ENST00000384433 107 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 RNU6-83P-201ENST00000384568 112 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 RNU2-50P-201ENST00000410494 143 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 RAP1BP1-201ENST00000412709 553 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AL133482.1-201ENST00000415988 498 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 Z75741.2-201ENST00000417272 1167 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 LINC01347-201ENST00000417964 355 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 USP9YP28-201ENST00000435142 589 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 THAP5P1-201ENST00000439089 262 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AC023271.1-201ENST00000445936 1090 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AL035551.1-201ENST00000446931 348 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AC234781.3-201ENST00000452540 973 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AC104634.1-201ENST00000452720 462 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 CBX1P2-201ENST00000453841 458 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 Z92846.1-201ENST00000456203 268 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AC005532.2-201ENST00000467154 373 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 AC069528.1-202ENST00000482888 637 ntBASIC5.34□□□□□ -1.55
DKK3Q9UBP4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms