Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC120338.1-201ENST00000625074 1541 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 Z99496.1-201ENST00000469424 1477 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5□□□□□ -1.61
LRFN1Q9P244 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
LRFN1Q9P244 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LRFN1Q9P244 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 ECM1P2-201ENST00000503354 1577 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5□□□□□ -1.61
LRFN1Q9P244 AC104964.3-201ENST00000606115 2860 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
LRFN1Q9P244 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5□□□□□ -1.61
LRFN1Q9P244 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 RNA5SP507-201ENST00000363603 121 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 RNU6-560P-201ENST00000364007 108 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 RN7SKP224-201ENST00000364140 325 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5□□□□□ -1.61
LRFN1Q9P244 RNU6-444P-201ENST00000383988 108 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 SNORA16A-201ENST00000384342 137 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5□□□□□ -1.61
LRFN1Q9P244 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 MTCO3P31-201ENST00000405526 789 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AL590084.1-201ENST00000407885 387 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 Y_RNA.625-201ENST00000411256 107 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 RPSAP35-201ENST00000413753 818 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 GTF2IP23-201ENST00000423746 351 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 RPL30P3-201ENST00000424262 333 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 RIMKLBP2-201ENST00000424737 654 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AC092447.3-201ENST00000426027 686 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 HMGN2P27-201ENST00000427352 270 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AC007559.1-201ENST00000428736 355 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 IFNNP1-201ENST00000429219 553 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 SEPT7P5-201ENST00000434048 306 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 OR52B5P-201ENST00000435337 951 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 YWHAZP8-201ENST00000436935 731 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5□□□□□ -1.61
LRFN1Q9P244 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5□□□□□ -1.61
LRFN1Q9P244 AC093155.1-201ENST00000440164 826 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 HMGB3P21-201ENST00000452483 547 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AL645937.3-201ENST00000453647 936 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 RFC5P1-201ENST00000454419 874 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 AC005532.2-201ENST00000467154 373 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5□□□□□ -1.61
LRFN1Q9P244 AP000893.1-201ENST00000474462 794 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AC231760.1-201ENST00000498002 260 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5□□□□□ -1.61
LRFN1Q9P244 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5□□□□□ -1.61
LRFN1Q9P244 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
LRFN1Q9P244 AC087808.1-201ENST00000520501 361 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
LRFN1Q9P244 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5□□□□□ -1.61
LRFN1Q9P244 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5□□□□□ -1.61
LRFN1Q9P244 AC122688.1-201ENST00000541494 223 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5□□□□□ -1.61
LRFN1Q9P244 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5□□□□□ -1.61
LRFN1Q9P244 EIF5A2P1-201ENST00000564027 460 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AGGF1P6-201ENST00000569213 976 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5□□□□□ -1.61
LRFN1Q9P244 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5□□□□□ -1.61
LRFN1Q9P244 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5□□□□□ -1.61
LRFN1Q9P244 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5□□□□□ -1.61
LRFN1Q9P244 AC061975.8-201ENST00000587058 721 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5□□□□□ -1.61
LRFN1Q9P244 AC116651.1-201ENST00000609724 556 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AL121612.2-201ENST00000612261 482 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5□□□□□ -1.61
LRFN1Q9P244 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5□□□□□ -1.61
LRFN1Q9P244 AC022509.4-201ENST00000621404 572 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AP002505.2-201ENST00000623585 696 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 AC138965.3-201ENST00000623875 498 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 OR52B5P-202ENST00000641118 1110 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 OFD1P9Y-201ENST00000417699 1491 ntBASIC5□□□□□ -1.61
LRFN1Q9P244 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5□□□□□ -1.61
LRFN1Q9P244 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
LRFN1Q9P244 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LRFN1Q9P244 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LRFN1Q9P244 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LRFN1Q9P244 RNU6-1066P-201ENST00000363573 105 ntBASIC4.99□□□□□ -1.61
LRFN1Q9P244 RNU6-115P-201ENST00000364310 107 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms