Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.67□□□□□ -1.34
CNTN3Q9P232 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.67□□□□□ -1.34
CNTN3Q9P232 MLECP1-201ENST00000615893 709 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC024884.1-201ENST00000620583 399 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC026634.1-201ENST00000634369 198 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 AP001541.1-201ENST00000623322 1904 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CNTN3Q9P232 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
CNTN3Q9P232 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CNTN3Q9P232 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC034229.2-201ENST00000566945 2508 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CNTN3Q9P232 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC092692.1-201ENST00000623625 2595 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 MTCO1P14-201ENST00000441695 1559 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 DOCK11P1-201ENST00000553480 5932 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 MIR506-201ENST00000384998 124 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 U8.14-201ENST00000390843 143 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AL596448.1-201ENST00000415024 392 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC104850.1-201ENST00000435940 476 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 SKP1P1-201ENST00000438081 489 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC144530.1-201ENST00000452862 555 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 ACTR3P3-201ENST00000480448 893 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC090638.1-201ENST00000498296 909 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC105914.1-201ENST00000511798 226 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC009977.1-201ENST00000586015 570 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC008115.3-201ENST00000614874 549 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 AL137067.2-201ENST00000621202 131 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 FRG1KP-201ENST00000623592 341 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC231657.1-201ENST00000624313 397 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC068880.5-201ENST00000624331 290 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC073488.3-201ENST00000631611 778 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC008627.1-201ENST00000517511 1704 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC006511.3-201ENST00000624929 1783 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AL157700.1-201ENST00000561973 1432 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CNTN3Q9P232 AC073365.1-203ENST00000641055 1992 ntBASIC6.66□□□□□ -1.34
CNTN3Q9P232 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CNTN3Q9P232 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CNTN3Q9P232 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CNTN3Q9P232 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CNTN3Q9P232 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CNTN3Q9P232 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.65□□□□□ -1.34
CNTN3Q9P232 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.65□□□□□ -1.34
CNTN3Q9P232 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CNTN3Q9P232 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CNTN3Q9P232 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CNTN3Q9P232 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
CNTN3Q9P232 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CNTN3Q9P232 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CNTN3Q9P232 SNORA70H-201ENST00000383910 135 ntBASIC6.65□□□□□ -1.34
CNTN3Q9P232 SNORA70J-201ENST00000384182 135 ntBASIC6.65□□□□□ -1.34
CNTN3Q9P232 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.65□□□□□ -1.34
CNTN3Q9P232 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.65□□□□□ -1.34
CNTN3Q9P232 RPL35AP31-201ENST00000418340 337 ntBASIC6.65□□□□□ -1.34
CNTN3Q9P232 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.65□□□□□ -1.34
CNTN3Q9P232 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.65□□□□□ -1.34
CNTN3Q9P232 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CNTN3Q9P232 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.65□□□□□ -1.34
CNTN3Q9P232 RPL23AP19-201ENST00000436229 369 ntBASIC6.65□□□□□ -1.34
CNTN3Q9P232 BMS1P10-201ENST00000443754 1120 ntBASIC6.65□□□□□ -1.34
CNTN3Q9P232 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.65□□□□□ -1.34
CNTN3Q9P232 AL022237.1-201ENST00000446663 358 ntBASIC6.65□□□□□ -1.34
CNTN3Q9P232 GAPDHP17-201ENST00000449858 1001 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms