Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 ENPP7P11-201ENST00000505915 627 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 HIGD1AP5-201ENST00000529959 259 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 OR4U1P-201ENST00000554958 912 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 MTND4P33-201ENST00000556706 766 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 MTND3P12-201ENST00000559068 328 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 MIR4675-201ENST00000577898 77 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 RN7SL52P-201ENST00000584271 284 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 AC068790.4-201ENST00000602474 263 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 AC025811.1-201ENST00000604312 472 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 AL022394.1-201ENST00000606979 292 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 MIR7973-1-201ENST00000614683 76 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 RN7SL722P-201ENST00000617780 284 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 RN7SL565P-201ENST00000618246 284 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 AL355493.4-201ENST00000618530 292 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 AL121895.2-201ENST00000619558 447 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 AC017104.5-201ENST00000637647 639 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.55□□□□□ -1.52
COL20A1Q9P218 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL20A1Q9P218 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL20A1Q9P218 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL20A1Q9P218 AC111188.2-201ENST00000529697 1387 ntBASIC5.55□□□□□ -1.52
COL20A1Q9P218 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL20A1Q9P218 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL20A1Q9P218 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL20A1Q9P218 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL20A1Q9P218 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 NPM1P40-201ENST00000412758 733 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 FAR2P2-201ENST00000413041 594 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 AC079809.1-201ENST00000415468 276 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 VPS26BP1-201ENST00000417155 755 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 AC005005.2-201ENST00000420779 380 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 FAR2P4-202ENST00000425399 584 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 RPL5P22-201ENST00000480199 884 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 AC093890.1-201ENST00000502554 540 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 AC091860.1-201ENST00000505723 432 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL20A1Q9P218 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 OR5M2P-201ENST00000529003 936 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 AC009097.3-201ENST00000563557 1018 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 AC022726.1-201ENST00000587475 207 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 AP001542.2-201ENST00000593141 364 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 AC025588.2-201ENST00000604851 466 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL20A1Q9P218 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL20A1Q9P218 AC021755.4-201ENST00000616620 456 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 MIR6853-201ENST00000619642 74 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL20A1Q9P218 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL20A1Q9P218 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL20A1Q9P218 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL20A1Q9P218 TRIM51GP-201ENST00000534741 1350 ntBASIC5.54□□□□□ -1.52
COL20A1Q9P218 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL20A1Q9P218 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL20A1Q9P218 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL20A1Q9P218 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.53□□□□□ -1.52
COL20A1Q9P218 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL20A1Q9P218 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL20A1Q9P218 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.53□□□□□ -1.52
COL20A1Q9P218 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
COL20A1Q9P218 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL20A1Q9P218 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
COL20A1Q9P218 AL590290.1-201ENST00000405336 380 ntBASIC5.53□□□□□ -1.52
COL20A1Q9P218 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.53□□□□□ -1.52
COL20A1Q9P218 BX510359.2-201ENST00000417920 305 ntBASIC5.53□□□□□ -1.52
COL20A1Q9P218 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.53□□□□□ -1.52
COL20A1Q9P218 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.53□□□□□ -1.52
COL20A1Q9P218 CDY14P-201ENST00000431260 1014 ntBASIC5.53□□□□□ -1.52
COL20A1Q9P218 RPS24P8-201ENST00000431490 402 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms