Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC078880.5-201ENST00000617845 421 ntBASIC4.56□□□□□ -1.68
SPHK1Q9NYA1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.56□□□□□ -1.68
SPHK1Q9NYA1 AC015804.1-201ENST00000622935 435 ntBASIC4.56□□□□□ -1.68
SPHK1Q9NYA1 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.56□□□□□ -1.68
SPHK1Q9NYA1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.56□□□□□ -1.68
SPHK1Q9NYA1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPHK1Q9NYA1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.56□□□□□ -1.68
SPHK1Q9NYA1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPHK1Q9NYA1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SPHK1Q9NYA1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPHK1Q9NYA1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPHK1Q9NYA1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPHK1Q9NYA1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 RNA5SP505-201ENST00000364748 108 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 RNU6-354P-201ENST00000383862 107 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 RNU6-610P-201ENST00000384264 107 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 HMGB1P13-201ENST00000406019 642 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 RN7SKP199-201ENST00000410325 305 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 RNU2-50P-201ENST00000410494 143 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 RPL26P29-201ENST00000415623 438 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AL590139.1-201ENST00000416267 400 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 ATG4AP1-201ENST00000416893 538 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC009302.1-201ENST00000417147 390 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 RPL7P57-201ENST00000423238 740 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 CKS1BP6-201ENST00000424932 240 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 MTCO1P52-201ENST00000433928 531 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC004938.1-201ENST00000438468 308 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 FHP1-201ENST00000442741 703 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC099063.2-201ENST00000446360 662 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 CEACAMP6-201ENST00000452007 574 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 HMGB1P26-201ENST00000452520 628 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC010326.1-201ENST00000462726 602 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 RPL21P47-201ENST00000483696 477 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 NIP7P2-201ENST00000485801 544 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC010374.1-201ENST00000503762 1237 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC108471.1-201ENST00000513977 287 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 RN7SKP157-201ENST00000516174 282 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 IGKV1-32-201ENST00000519290 311 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 NPM1P47-201ENST00000560843 856 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC106734.1-201ENST00000568646 663 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC090666.1-201ENST00000578241 445 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC022884.3-201ENST00000579571 248 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC105148.1-201ENST00000604961 409 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AL158050.2-201ENST00000605336 568 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AL008729.2-201ENST00000606393 473 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 uc_338.18-201ENST00000615451 175 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC015914.2-201ENST00000618167 288 ntBASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.55□□□□□ -1.68
SPHK1Q9NYA1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 AC079741.1-201ENST00000321498 212 ntBASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 SNORA68.2-201ENST00000391263 128 ntBASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 NCSTNP1-201ENST00000406229 144 ntBASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 AC008173.1-201ENST00000418901 264 ntBASIC4.54□□□□□ -1.68
SPHK1Q9NYA1 AC140479.3-201ENST00000418944 1126 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms