Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AC147055.4-201ENST00000504399 745 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AC073358.1-201ENST00000505671 684 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 PGBD4P4-201ENST00000509673 613 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AC010587.2-201ENST00000511727 448 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 RNU6-405P-201ENST00000516637 110 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AC044913.1-201ENST00000557200 430 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AP005205.1-201ENST00000563503 508 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AC018558.5-201ENST00000565840 952 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 ATP5F1P7-201ENST00000567330 760 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AC012414.6-201ENST00000568241 401 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AC091135.1-201ENST00000585943 307 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AF250324.2-201ENST00000608299 610 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AC017083.3-201ENST00000609955 700 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AC026368.1-201ENST00000614934 690 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 uc_338.18-201ENST00000615451 175 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AL442128.2-201ENST00000620246 1824 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 KYNUP3-201ENST00000574386 1341 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AC083899.1-201ENST00000454465 3819 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 AL731532.1-201ENST00000623972 4236 ntBASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.19□□□□□ -1.42
PDLIM7Q9NR12 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC005539.1-201ENST00000443768 1479 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 Y_RNA.248-201ENST00000364501 109 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 RNU1-43P-201ENST00000365052 165 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 RNU4-31P-201ENST00000384211 141 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 SNORA67-201ENST00000384423 137 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 CYB5AP4-201ENST00000396692 399 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 HMGB3P7-201ENST00000400214 611 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 DUTP5-201ENST00000406790 469 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 SNORA11-201ENST00000408789 128 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC016397.1-201ENST00000412463 242 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC093162.1-201ENST00000419682 124 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 GTF2IP23-201ENST00000423746 351 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AL590399.2-201ENST00000427536 309 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC093267.1-201ENST00000489176 961 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 RPS17P5-201ENST00000498293 408 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 WBP1LP4-201ENST00000505043 344 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC109464.2-201ENST00000510242 943 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AL671862.1-201ENST00000515851 349 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AP001317.1-201ENST00000531194 960 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AHI1-217ENST00000534469 680 ntTSL 3 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AP001267.4-201ENST00000602598 545 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AP000238.1-201ENST00000608759 426 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC099676.1-201ENST00000608886 657 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AL359314.1-201ENST00000616913 261 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC127502.3-201ENST00000636170 1206 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 AC087821.2-201ENST00000637086 450 ntBASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PDLIM7Q9NR12 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.17□□□□□ -1.42
PDLIM7Q9NR12 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
PDLIM7Q9NR12 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.17□□□□□ -1.42
PDLIM7Q9NR12 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDLIM7Q9NR12 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDLIM7Q9NR12 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDLIM7Q9NR12 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.17□□□□□ -1.42
PDLIM7Q9NR12 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms