Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 RNA5SP191-201ENST00000362585 102 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AL109941.1-201ENST00000401925 229 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 RN7SKP267-201ENST00000410381 285 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 BTF3P9-201ENST00000418784 283 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 RPS26P13-201ENST00000419030 330 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AL645608.4-201ENST00000423619 154 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC104837.2-201ENST00000427236 424 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 CDY14P-201ENST00000431260 1014 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 Z85994.2-201ENST00000434327 452 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 PSMD10P3-201ENST00000437000 448 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 GSTA7P-201ENST00000438425 448 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 CDY12P-201ENST00000440679 1015 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 CDY13P-201ENST00000445813 1015 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 CDY23P-201ENST00000451661 1014 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC079168.2-201ENST00000453977 416 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC104629.2-201ENST00000468627 598 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 NDUFA5P12-201ENST00000503796 343 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 RN7SKP276-201ENST00000516242 268 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 SOX5P1-201ENST00000524155 1127 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 MIR4716-201ENST00000579628 84 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 MIR4436B2-201ENST00000581415 91 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 MIR4436B1-201ENST00000583272 91 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC110743.1-201ENST00000584870 478 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC103792.1-201ENST00000603591 919 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC011453.2-201ENST00000603737 729 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AL391358.1-201ENST00000605342 190 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 OR6R2P-201ENST00000609216 300 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC009318.3-201ENST00000616916 503 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 AC233309.1-201ENST00000619522 751 ntBASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCNB1IP1Q9NPC3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 RNA5SP307-201ENST00000362863 116 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 BX510359.2-201ENST00000417920 305 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 DPY19L1P2-201ENST00000426647 915 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AC016831.4-201ENST00000438302 307 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 DDX39BP2-208ENST00000453923 258 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 ISCUP1-201ENST00000454451 448 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 RPS3AP53-201ENST00000454716 778 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AC079804.1-201ENST00000461922 436 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AC083982.1-201ENST00000485679 344 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 CDH12P2-201ENST00000504393 298 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 ATG10-AS1-201ENST00000504846 648 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 PHBP17-201ENST00000528576 541 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 RN7SL652P-201ENST00000577769 300 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AC068790.5-201ENST00000602741 355 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 AC008536.1-201ENST00000602872 669 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 uc_338.9-201ENST00000617424 182 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 NXPH1-205ENST00000602349 1953 ntBASIC4.13□□□□□ -1.75
CCNB1IP1Q9NPC3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNB1IP1Q9NPC3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms