Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL590084.1-201ENST00000407885 387 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS11Q9H270 MRPL53P1-201ENST00000414323 319 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.64□□□□□ -1.51
VPS11Q9H270 RPL7P53-201ENST00000421245 739 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS11Q9H270 AC004074.1-201ENST00000421810 1063 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 NAP1L4P2-201ENST00000425958 899 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 RWDD4P2-201ENST00000426392 563 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 YWHAEP5-201ENST00000431545 765 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 MTND1P32-201ENST00000433043 938 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS11Q9H270 PNKDP1-201ENST00000435914 430 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AL031663.1-201ENST00000437445 219 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AC002542.1-201ENST00000440683 193 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AC073465.2-201ENST00000440938 498 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS11Q9H270 FGF7P6-202ENST00000451282 293 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AL354710.1-201ENST00000453641 246 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS11Q9H270 YRDCP3-201ENST00000456507 480 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS11Q9H270 NXT1P1-201ENST00000458481 316 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 RNU6-1218P-201ENST00000458990 108 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AC084754.1-201ENST00000463466 464 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 TRBV8-2-201ENST00000475637 270 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
VPS11Q9H270 RN7SL568P-201ENST00000493069 298 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AC092349.1-201ENST00000504903 310 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS11Q9H270 KRT19P6-201ENST00000510983 209 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS11Q9H270 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.64□□□□□ -1.51
VPS11Q9H270 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS11Q9H270 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
VPS11Q9H270 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.64□□□□□ -1.51
VPS11Q9H270 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS11Q9H270 AP003033.2-201ENST00000528901 805 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 OR5BC1P-201ENST00000529327 739 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 PCNAP4-201ENST00000532690 730 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS11Q9H270 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS11Q9H270 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS11Q9H270 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS11Q9H270 NDUFA5P11-201ENST00000567995 343 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS11Q9H270 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS11Q9H270 MIR4260-201ENST00000583107 67 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS11Q9H270 AC090236.2-201ENST00000587933 1101 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AC022146.1-201ENST00000595307 847 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS11Q9H270 AC009237.13-201ENST00000603193 276 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AC100793.4-201ENST00000613683 429 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS11Q9H270 AC095031.1-201ENST00000623685 672 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS11Q9H270 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS11Q9H270 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS11Q9H270 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS11Q9H270 AC018809.2-201ENST00000602436 3823 ntBASIC5.64□□□□□ -1.51
VPS11Q9H270 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS11Q9H270 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
VPS11Q9H270 SGO1P2-201ENST00000429458 1589 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS11Q9H270 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS11Q9H270 PWAR1-201ENST00000624188 2414 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS11Q9H270 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS11Q9H270 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VPS11Q9H270 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS11Q9H270 Y_RNA.70-201ENST00000362886 110 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 SNORD116.1-201ENST00000365628 92 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 RNU6-1011P-201ENST00000384668 107 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS11Q9H270 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS11Q9H270 MTND4P3-201ENST00000417829 541 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 FAM183DP-201ENST00000421987 399 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 RIMKLBP2-201ENST00000424737 654 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VPS11Q9H270 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS11Q9H270 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS11Q9H270 AC241584.1-201ENST00000438469 1241 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 AL592437.1-201ENST00000443781 492 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 HMGB3P6-201ENST00000444896 598 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS11Q9H270 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS11Q9H270 RPL7P32-201ENST00000457119 744 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 AC009963.3-201ENST00000458090 486 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 AC098818.1-201ENST00000478593 252 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 AL161747.1-201ENST00000480068 358 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 AC069304.1-201ENST00000491593 704 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 AC091965.2-201ENST00000512324 613 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 AC098976.1-201ENST00000513014 541 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 AC116347.2-201ENST00000514912 523 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 TMEM97P2-201ENST00000517841 403 ntBASIC5.63□□□□□ -1.51
VPS11Q9H270 DUXAP2-201ENST00000519198 589 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms