Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNU1-45P-201ENST00000517191 141 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.8□□□□□ -1.48
USP47Q96K76 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
USP47Q96K76 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.8□□□□□ -1.48
USP47Q96K76 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.8□□□□□ -1.48
USP47Q96K76 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.8□□□□□ -1.48
USP47Q96K76 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.8□□□□□ -1.48
USP47Q96K76 AL121834.1-201ENST00000572284 509 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 MIR4444-1-201ENST00000581696 74 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 MIR4444-2-201ENST00000584390 74 ntBASIC5.8□□□□□ -1.48
USP47Q96K76 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.8□□□□□ -1.48
USP47Q96K76 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
USP47Q96K76 AC015813.6-201ENST00000624409 5808 ntBASIC5.79□□□□□ -1.48
USP47Q96K76 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP47Q96K76 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
USP47Q96K76 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP47Q96K76 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.79□□□□□ -1.48
USP47Q96K76 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
USP47Q96K76 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.79□□□□□ -1.48
USP47Q96K76 AC006326.1-201ENST00000445465 787 ntBASIC5.79□□□□□ -1.48
USP47Q96K76 AC025554.1-201ENST00000505641 188 ntBASIC5.79□□□□□ -1.48
USP47Q96K76 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.79□□□□□ -1.48
USP47Q96K76 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.79□□□□□ -1.48
USP47Q96K76 CYP4A43P-201ENST00000568156 121 ntBASIC5.79□□□□□ -1.48
USP47Q96K76 QTRT1P1-201ENST00000604344 1078 ntBASIC5.79□□□□□ -1.48
USP47Q96K76 MIR7702-201ENST00000621931 59 ntBASIC5.79□□□□□ -1.48
USP47Q96K76 AC112200.1-201ENST00000625015 234 ntBASIC5.79□□□□□ -1.48
USP47Q96K76 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
USP47Q96K76 AC139426.3-201ENST00000605648 2059 ntBASIC5.78□□□□□ -1.48
USP47Q96K76 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP47Q96K76 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP47Q96K76 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP47Q96K76 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.78□□□□□ -1.48
USP47Q96K76 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP47Q96K76 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.78□□□□□ -1.48
USP47Q96K76 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP47Q96K76 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
USP47Q96K76 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP47Q96K76 MT-RNR1-201ENST00000389680 954 ntBASIC5.78□□□□□ -1.48
USP47Q96K76 ENSAP1-201ENST00000392855 326 ntBASIC5.78□□□□□ -1.48
USP47Q96K76 RPL21P65-201ENST00000406094 466 ntBASIC5.78□□□□□ -1.48
USP47Q96K76 RNA5SP44-201ENST00000410446 133 ntBASIC5.78□□□□□ -1.48
USP47Q96K76 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
USP47Q96K76 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.78□□□□□ -1.48
USP47Q96K76 AC115285.1-201ENST00000424879 736 ntBASIC5.78□□□□□ -1.48
USP47Q96K76 AL117339.2-201ENST00000430475 180 ntBASIC5.78□□□□□ -1.48
USP47Q96K76 AL358472.1-201ENST00000431295 329 ntBASIC5.78□□□□□ -1.48
USP47Q96K76 RPL23AP2-201ENST00000471227 466 ntBASIC5.78□□□□□ -1.48
USP47Q96K76 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.78□□□□□ -1.48
USP47Q96K76 STMN1P2-201ENST00000508435 439 ntBASIC5.78□□□□□ -1.48
USP47Q96K76 DYNLL1P4-201ENST00000549314 266 ntBASIC5.78□□□□□ -1.48
USP47Q96K76 AC112484.5-201ENST00000624189 228 ntBASIC5.78□□□□□ -1.48
USP47Q96K76 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
USP47Q96K76 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP47Q96K76 AC120036.2-201ENST00000509729 1474 ntBASIC5.77□□□□□ -1.49
USP47Q96K76 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP47Q96K76 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP47Q96K76 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP47Q96K76 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP47Q96K76 AL607077.1-201ENST00000401718 499 ntBASIC5.77□□□□□ -1.49
USP47Q96K76 HSPE1P12-201ENST00000412576 301 ntBASIC5.77□□□□□ -1.49
USP47Q96K76 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP47Q96K76 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP47Q96K76 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
USP47Q96K76 RPS4XP4-201ENST00000443195 763 ntBASIC5.77□□□□□ -1.49
USP47Q96K76 VN1R34P-201ENST00000447387 883 ntBASIC5.77□□□□□ -1.49
USP47Q96K76 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
USP47Q96K76 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.77□□□□□ -1.49
USP47Q96K76 RNU7-143P-201ENST00000516781 65 ntBASIC5.77□□□□□ -1.49
USP47Q96K76 MTND1P6-201ENST00000523621 946 ntBASIC5.77□□□□□ -1.49
USP47Q96K76 MIR4286-201ENST00000580651 93 ntBASIC5.77□□□□□ -1.49
USP47Q96K76 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.77□□□□□ -1.49
USP47Q96K76 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.77□□□□□ -1.49
USP47Q96K76 AL353600.1-201ENST00000608148 251 ntBASIC5.77□□□□□ -1.49
USP47Q96K76 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.77□□□□□ -1.49
USP47Q96K76 AP005264.7-201ENST00000625003 745 ntBASIC5.77□□□□□ -1.49
USP47Q96K76 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
USP47Q96K76 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
USP47Q96K76 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.77□□□□□ -1.49
USP47Q96K76 USP9YP4-201ENST00000424401 1745 ntBASIC5.76□□□□□ -1.49
USP47Q96K76 MAPK10-320ENST00000641462 6696 ntBASIC5.76□□□□□ -1.49
USP47Q96K76 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
USP47Q96K76 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
USP47Q96K76 RNU1-108P-201ENST00000362556 161 ntBASIC5.76□□□□□ -1.49
USP47Q96K76 CYCSP19-201ENST00000411715 316 ntBASIC5.76□□□□□ -1.49
USP47Q96K76 PGBD4P8-201ENST00000412993 562 ntBASIC5.76□□□□□ -1.49
USP47Q96K76 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.76□□□□□ -1.49
USP47Q96K76 RPL12P18-201ENST00000437175 325 ntBASIC5.76□□□□□ -1.49
USP47Q96K76 RPL21P89-201ENST00000444021 467 ntBASIC5.76□□□□□ -1.49
USP47Q96K76 RPL7P1-201ENST00000468161 747 ntBASIC5.76□□□□□ -1.49
USP47Q96K76 RPL7P9-201ENST00000468715 747 ntBASIC5.76□□□□□ -1.49
USP47Q96K76 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.76□□□□□ -1.49
USP47Q96K76 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.76□□□□□ -1.49
USP47Q96K76 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.76□□□□□ -1.49
USP47Q96K76 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.76□□□□□ -1.49
USP47Q96K76 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.76□□□□□ -1.49
USP47Q96K76 AC055839.1-201ENST00000634467 498 ntBASIC5.76□□□□□ -1.49
USP47Q96K76 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP47Q96K76 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
USP47Q96K76 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms