Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 EIF4A1P11-201ENST00000451239 222 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AC009963.2-201ENST00000453431 138 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AL354710.1-201ENST00000453641 246 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 RPL35P6-201ENST00000490024 372 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 DEFB109F-201ENST00000491870 277 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AL592156.1-201ENST00000508758 304 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 RN7SKP122-201ENST00000515923 296 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AC091979.2-201ENST00000607514 214 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AL353600.1-201ENST00000608148 251 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 MLECP1-201ENST00000615893 709 ntBASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.35□□□□□ -1.71
ECHDC3Q96DC8 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 RPL32P3-201ENST00000359025 275 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 RNU4-7P-201ENST00000364758 141 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 OR6C69P-201ENST00000394268 893 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 MIR1911-201ENST00000410783 80 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 NRBF2P2-201ENST00000413087 861 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 AC234779.1-201ENST00000425910 285 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 CLIC4P1-201ENST00000453177 535 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 RPL7AP52-201ENST00000458096 790 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 RPS20P4-201ENST00000461659 355 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 RPL5P30-201ENST00000465511 891 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 AC109327.1-201ENST00000471666 403 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 RN7SL860P-201ENST00000473738 223 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 AC083829.1-201ENST00000503756 657 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 AC008958.1-201ENST00000511047 682 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 HMGB3P13-201ENST00000511263 607 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 RNA5SP73-201ENST00000516744 108 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 ADAM3B-201ENST00000569937 840 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 SLC25A36P1-201ENST00000590111 465 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 FAM27D1-201ENST00000612308 341 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 AL445363.3-201ENST00000623080 671 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 AP003497.2-201ENST00000624220 967 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 MIR3653-201ENST00000625572 110 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 BX005019.1-201ENST00000561881 1810 ntBASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ECHDC3Q96DC8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
ECHDC3Q96DC8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.34□□□□□ -1.72
ECHDC3Q96DC8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ECHDC3Q96DC8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ECHDC3Q96DC8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC090971.4-201ENST00000560291 1800 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 MIR365B-201ENST00000362317 111 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 RNU1-14P-201ENST00000362759 152 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 RAB28P1-201ENST00000411517 641 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 RPL23AP26-201ENST00000412728 464 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 COX6CP17-201ENST00000421389 185 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC099336.2-201ENST00000422457 254 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 RPS12P5-201ENST00000423449 371 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 EIF1P3-201ENST00000423841 334 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 NIPA2P1-201ENST00000426223 976 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AL353597.2-202ENST00000434901 373 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 ARL4AP3-201ENST00000441452 574 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 RPL23AP81-201ENST00000455252 467 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC099560.2-201ENST00000457554 255 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC012158.1-204ENST00000483430 465 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC106806.2-201ENST00000509365 500 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 MTCO3P42-201ENST00000509488 518 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 PGBD4P4-201ENST00000509673 613 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms