Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNU6-444P-201ENST00000383988 108 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 OR7E101P-201ENST00000400428 513 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AL136133.1-201ENST00000413694 376 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC009237.2-201ENST00000421358 284 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AL590609.2-201ENST00000421430 368 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 RPL12P34-201ENST00000424532 479 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 IFNNP1-201ENST00000429219 553 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 RPL7AP49-201ENST00000429522 581 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AL591438.1-201ENST00000433508 581 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 YRDCP3-201ENST00000456507 480 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 MTND1P16-201ENST00000465177 898 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AP002884.1-201ENST00000479691 655 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 NENFP3-201ENST00000503735 313 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 MRPS33P3-201ENST00000513456 322 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC060775.1-201ENST00000518241 520 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 PMS2P3-207ENST00000529061 717 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC002400.1-201ENST00000569310 726 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC093765.1-201ENST00000603758 881 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC069304.3-201ENST00000603938 1084 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC133552.5-201ENST00000604266 540 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 MIR7109-201ENST00000613748 65 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF220Q5VTB9 AC107982.1-201ENST00000507171 1300 ntBASIC5.22□□□□□ -1.57
RNF220Q5VTB9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RNF220Q5VTB9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
RNF220Q5VTB9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
RNF220Q5VTB9 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 FAM3C2-201ENST00000312214 681 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 Y_RNA.169-201ENST00000363745 96 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 Y_RNA.311-201ENST00000365068 96 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 Y_RNA.408-201ENST00000383987 102 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC008280.1-201ENST00000418851 412 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AL035660.1-201ENST00000422041 222 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC104333.2-201ENST00000422630 192 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 RPP40P1-201ENST00000426762 456 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AL022331.1-201ENST00000429025 477 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC023347.2-201ENST00000433994 462 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 YWHAZP7-201ENST00000436906 631 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 MTCYBP34-201ENST00000439552 670 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 FAR2P1-206ENST00000449736 709 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AL133217.1-201ENST00000450980 425 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 NXT1P1-201ENST00000458481 316 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AP000942.1-201ENST00000463969 747 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC022215.1-201ENST00000481770 362 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 RPL32P33-201ENST00000487023 394 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC021146.8-201ENST00000507455 733 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF220Q5VTB9 MTCO1P30-201ENST00000515244 580 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC021678.3-201ENST00000517893 476 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 AC011853.1-201ENST00000518911 454 ntBASIC5.21□□□□□ -1.58
RNF220Q5VTB9 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms