Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC084198.1-201ENST00000477747 402 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 RNU1-44P-201ENST00000384453 163 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 TPT1P1-201ENST00000458495 518 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC108751.2-201ENST00000469993 231 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC020914.6-201ENST00000594327 272 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC006077.1-201ENST00000604746 343 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AC019278.1-201ENST00000623516 479 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 AL356274.2-201ENST00000624379 3752 ntBASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VPS13DQ5THJ4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 RN7SKP74-201ENST00000362849 309 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 MIR1289-1-201ENST00000408836 144 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 OR4K6P-201ENST00000416478 897 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AL133244.1-201ENST00000456007 258 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AL513477.2-201ENST00000607858 568 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AC095038.2-201ENST00000621464 1070 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AL591135.1-201ENST00000401578 5914 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AL358178.1-201ENST00000407698 397 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AL035423.1-201ENST00000420331 213 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 NPM1P25-201ENST00000429734 854 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 FCF1P7-201ENST00000451185 558 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 RPL37P3-201ENST00000456825 293 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 RPL5P24-201ENST00000463742 885 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 RNA5SP303-201ENST00000516192 130 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 RNA5SP22-201ENST00000365393 109 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 PEX12P1-201ENST00000400284 1048 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 HSFY4P-201ENST00000415994 1181 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 RPS4XP10-201ENST00000465034 731 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 RPL7P1-201ENST00000468161 747 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 RPL7P9-201ENST00000468715 747 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 CYCSP28-201ENST00000534284 321 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 AC006960.3-201ENST00000561845 705 ntBASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13DQ5THJ4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 RN7SKP186-201ENST00000365371 303 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 UBTFL3-201ENST00000418934 1024 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 RPL23AP46-201ENST00000438548 490 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 UBTFL6-201ENST00000477929 1024 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 OSBPL9P2-201ENST00000526582 1228 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 RPL21P12-201ENST00000559810 515 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 AL049634.3-201ENST00000604968 457 ntBASIC2.66□□□□□ -1.98
VPS13DQ5THJ4 AC055839.1-201ENST00000634467 498 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms