Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CDY23P-201ENST00000451661 1014 ntBASIC4.18□□□□□ -1.74
VSX2P58304 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.18□□□□□ -1.74
VSX2P58304 RPL35AP15-201ENST00000468042 339 ntBASIC4.18□□□□□ -1.74
VSX2P58304 AC109327.1-201ENST00000471666 403 ntBASIC4.18□□□□□ -1.74
VSX2P58304 AC105918.1-201ENST00000474399 838 ntBASIC4.18□□□□□ -1.74
VSX2P58304 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX2P58304 AC108022.1-201ENST00000493466 478 ntBASIC4.18□□□□□ -1.74
VSX2P58304 NDUFB4P12-201ENST00000513465 390 ntBASIC4.18□□□□□ -1.74
VSX2P58304 OR5BC1P-201ENST00000529327 739 ntBASIC4.18□□□□□ -1.74
VSX2P58304 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.18□□□□□ -1.74
VSX2P58304 CYCSP28-201ENST00000534284 321 ntBASIC4.18□□□□□ -1.74
VSX2P58304 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VSX2P58304 AC090515.3-201ENST00000560431 315 ntBASIC4.18□□□□□ -1.74
VSX2P58304 AC023575.1-201ENST00000580510 358 ntBASIC4.18□□□□□ -1.74
VSX2P58304 KPNA2P3-201ENST00000584190 848 ntBASIC4.18□□□□□ -1.74
VSX2P58304 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.18□□□□□ -1.74
VSX2P58304 AC114781.5-201ENST00000615297 108 ntBASIC4.18□□□□□ -1.74
VSX2P58304 AC006338.2-201ENST00000616864 791 ntBASIC4.18□□□□□ -1.74
VSX2P58304 AL023881.1-201ENST00000621088 301 ntBASIC4.18□□□□□ -1.74
VSX2P58304 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VSX2P58304 AP000843.1-201ENST00000624880 701 ntBASIC4.18□□□□□ -1.74
VSX2P58304 CCT8P1-201ENST00000413611 1657 ntBASIC4.18□□□□□ -1.74
VSX2P58304 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.18□□□□□ -1.74
VSX2P58304 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.18□□□□□ -1.74
VSX2P58304 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
VSX2P58304 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VSX2P58304 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VSX2P58304 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX2P58304 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VSX2P58304 MTND4P26-201ENST00000415971 1359 ntBASIC4.17□□□□□ -1.74
VSX2P58304 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VSX2P58304 RNA5SP307-201ENST00000362863 116 ntBASIC4.17□□□□□ -1.74
VSX2P58304 SNORA70.2-201ENST00000364506 135 ntBASIC4.17□□□□□ -1.74
VSX2P58304 RNU1-44P-201ENST00000384453 163 ntBASIC4.17□□□□□ -1.74
VSX2P58304 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VSX2P58304 SNORA11F-201ENST00000408237 128 ntBASIC4.17□□□□□ -1.74
VSX2P58304 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VSX2P58304 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.17□□□□□ -1.74
VSX2P58304 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.17□□□□□ -1.74
VSX2P58304 GSTA7P-201ENST00000438425 448 ntBASIC4.17□□□□□ -1.74
VSX2P58304 RPL23AP52-201ENST00000439311 478 ntBASIC4.17□□□□□ -1.74
VSX2P58304 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.17□□□□□ -1.74
VSX2P58304 ATP5G1P3-201ENST00000463301 410 ntBASIC4.17□□□□□ -1.74
VSX2P58304 AP002981.1-201ENST00000517692 975 ntBASIC4.17□□□□□ -1.74
VSX2P58304 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VSX2P58304 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.17□□□□□ -1.74
VSX2P58304 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.17□□□□□ -1.74
VSX2P58304 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.17□□□□□ -1.74
VSX2P58304 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.17□□□□□ -1.74
VSX2P58304 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.17□□□□□ -1.74
VSX2P58304 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.17□□□□□ -1.74
VSX2P58304 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.17□□□□□ -1.74
VSX2P58304 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.17□□□□□ -1.74
VSX2P58304 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.17□□□□□ -1.74
VSX2P58304 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.17□□□□□ -1.74
VSX2P58304 AC010201.1-201ENST00000605051 540 ntBASIC4.17□□□□□ -1.74
VSX2P58304 ARF4P1-201ENST00000605447 541 ntBASIC4.17□□□□□ -1.74
VSX2P58304 AC140479.6-201ENST00000633535 357 ntBASIC4.17□□□□□ -1.74
VSX2P58304 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.17□□□□□ -1.74
VSX2P58304 AC068254.2-201ENST00000623938 3577 ntBASIC4.17□□□□□ -1.74
VSX2P58304 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.17□□□□□ -1.74
VSX2P58304 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
VSX2P58304 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.17□□□□□ -1.74
VSX2P58304 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VSX2P58304 EIF2AP4-201ENST00000424793 1781 ntBASIC4.17□□□□□ -1.74
VSX2P58304 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VSX2P58304 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
VSX2P58304 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
VSX2P58304 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VSX2P58304 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VSX2P58304 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
VSX2P58304 AL356317.1-201ENST00000396110 1436 ntBASIC4.16□□□□□ -1.74
VSX2P58304 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
VSX2P58304 Y_RNA.62-201ENST00000362840 99 ntBASIC4.16□□□□□ -1.74
VSX2P58304 RNU6-984P-201ENST00000363236 109 ntBASIC4.16□□□□□ -1.74
VSX2P58304 RNA5SP175-201ENST00000364275 119 ntBASIC4.16□□□□□ -1.74
VSX2P58304 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.16□□□□□ -1.74
VSX2P58304 OR13C3-201ENST00000374781 1108 ntBASIC4.16□□□□□ -1.74
VSX2P58304 AC068538.1-201ENST00000376856 336 ntBASIC4.16□□□□□ -1.74
VSX2P58304 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
VSX2P58304 AC097374.1-203ENST00000400783 485 ntBASIC4.16□□□□□ -1.74
VSX2P58304 AL160275.2-201ENST00000412010 394 ntBASIC4.16□□□□□ -1.74
VSX2P58304 VDAC1P9-201ENST00000412766 841 ntBASIC4.16□□□□□ -1.74
VSX2P58304 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.16□□□□□ -1.74
VSX2P58304 AC010469.1-201ENST00000463864 576 ntBASIC4.16□□□□□ -1.74
VSX2P58304 FTH1P2-201ENST00000466086 412 ntBASIC4.16□□□□□ -1.74
VSX2P58304 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.16□□□□□ -1.74
VSX2P58304 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.16□□□□□ -1.74
VSX2P58304 PGBD4P4-201ENST00000509673 613 ntBASIC4.16□□□□□ -1.74
VSX2P58304 PSMB7P1-201ENST00000556349 514 ntBASIC4.16□□□□□ -1.74
VSX2P58304 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.16□□□□□ -1.74
VSX2P58304 PARP1P2-201ENST00000556806 195 ntBASIC4.16□□□□□ -1.74
VSX2P58304 HMGB3P26-201ENST00000560051 582 ntBASIC4.16□□□□□ -1.74
VSX2P58304 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.16□□□□□ -1.74
VSX2P58304 AC136624.4-201ENST00000573044 370 ntBASIC4.16□□□□□ -1.74
VSX2P58304 FAM106CP-201ENST00000582212 507 ntBASIC4.16□□□□□ -1.74
VSX2P58304 RPL7P50-201ENST00000600588 727 ntBASIC4.16□□□□□ -1.74
VSX2P58304 AC025175.1-201ENST00000606482 759 ntBASIC4.16□□□□□ -1.74
VSX2P58304 AC015813.4-201ENST00000610469 179 ntBASIC4.16□□□□□ -1.74
VSX2P58304 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms