Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN6P56747 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.26□□□□□ -1.73
CLDN6P56747 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN6P56747 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.26□□□□□ -1.73
CLDN6P56747 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN6P56747 DPRXP4-201ENST00000578053 568 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN6P56747 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN6P56747 AL592494.3-201ENST00000609485 464 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 AP005212.4-201ENST00000614206 710 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 AC015722.2-201ENST00000622210 551 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN6P56747 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN6P56747 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN6P56747 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN6P56747 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CLDN6P56747 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN6P56747 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN6P56747 AL359922.3-201ENST00000624779 1670 ntBASIC4.26□□□□□ -1.73
CLDN6P56747 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN6P56747 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CLDN6P56747 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN6P56747 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN6P56747 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLDN6P56747 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN6P56747 SNORA71.3-201ENST00000362582 128 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 BMS1P3-201ENST00000372011 932 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLDN6P56747 AL592291.1-201ENST00000403830 352 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 U3.35-201ENST00000408405 208 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 EIF4A1P3-201ENST00000411521 244 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN6P56747 AL590609.2-201ENST00000421430 368 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.25□□□□□ -1.73
CLDN6P56747 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN6P56747 AC146944.2-203ENST00000502493 354 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 AC008958.1-201ENST00000511047 682 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 AC139495.1-202ENST00000513164 354 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 AC108064.1-201ENST00000513791 460 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN6P56747 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.25□□□□□ -1.73
CLDN6P56747 RN7SL703P-201ENST00000578485 302 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 AC233702.9-201ENST00000581528 203 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN6P56747 AC112484.5-201ENST00000624189 228 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 AC004777.1-201ENST00000624317 287 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN6P56747 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN6P56747 CPHL1P-201ENST00000461341 3407 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 OR10AB1P-202ENST00000641219 1686 ntBASIC4.25□□□□□ -1.73
CLDN6P56747 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CLDN6P56747 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CLDN6P56747 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN6P56747 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CLDN6P56747 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN6P56747 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLDN6P56747 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 RNU4-7P-201ENST00000364758 141 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN6P56747 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN6P56747 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN6P56747 RPL21P65-201ENST00000406094 466 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN6P56747 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN6P56747 COX6CP15-201ENST00000426313 211 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 GOT2P5-201ENST00000433995 546 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 MTND2P2-201ENST00000434633 945 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLDN6P56747 VN1R34P-201ENST00000447387 883 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN6P56747 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN6P56747 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN6P56747 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN6P56747 AC022336.1-201ENST00000475510 337 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 RN7SL809P-201ENST00000482040 297 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN6P56747 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN6P56747 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN6P56747 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN6P56747 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN6P56747 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN6P56747 HNRNPCP4-201ENST00000571636 900 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN6P56747 AL354984.3-201ENST00000604803 325 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 AC097505.1-201ENST00000610199 565 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN6P56747 uc_338.13-201ENST00000618243 179 ntBASIC4.24□□□□□ -1.73
CLDN6P56747 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN6P56747 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN6P56747 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN6P56747 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN6P56747 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN6P56747 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN6P56747 AC107027.3-201ENST00000565095 3473 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CLDN6P56747 Y_RNA.333-201ENST00000365274 102 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.23□□□□□ -1.73
CLDN6P56747 AL607077.1-201ENST00000401718 499 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 SNORA11.1-201ENST00000408133 129 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms