Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 VN1R48P-201ENST00000448149 1036 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 AC099560.2-201ENST00000457554 255 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 AC053481.1-201ENST00000467217 306 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 RPL12P20-201ENST00000475538 479 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.25□□□□□ -1.73
PKNOX1P55347 AC008638.1-201ENST00000506035 866 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.25□□□□□ -1.73
PKNOX1P55347 OR5M7P-201ENST00000526140 972 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 OR7E10P-201ENST00000526420 991 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PKNOX1P55347 AL356489.2-201ENST00000566968 3528 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 MTCO2P22-201ENST00000603246 681 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.25□□□□□ -1.73
PKNOX1P55347 AC019080.5-201ENST00000624891 757 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PKNOX1P55347 MAPK10-253ENST00000641010 4072 ntBASIC4.25□□□□□ -1.73
PKNOX1P55347 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.25□□□□□ -1.73
PKNOX1P55347 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PKNOX1P55347 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PKNOX1P55347 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.25□□□□□ -1.73
PKNOX1P55347 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.25□□□□□ -1.73
PKNOX1P55347 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PKNOX1P55347 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PKNOX1P55347 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.24□□□□□ -1.73
PKNOX1P55347 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PKNOX1P55347 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PKNOX1P55347 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PKNOX1P55347 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PKNOX1P55347 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PKNOX1P55347 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.24□□□□□ -1.73
PKNOX1P55347 MTCYBP29-201ENST00000436327 1006 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 FHP1-201ENST00000442741 703 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.24□□□□□ -1.73
PKNOX1P55347 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.24□□□□□ -1.73
PKNOX1P55347 AC096741.1-201ENST00000472250 846 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 AC025445.1-201ENST00000502728 300 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PKNOX1P55347 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.24□□□□□ -1.73
PKNOX1P55347 ATP1B1P1-201ENST00000509767 915 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.24□□□□□ -1.73
PKNOX1P55347 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.24□□□□□ -1.73
PKNOX1P55347 NPM1P35-201ENST00000533043 868 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
PKNOX1P55347 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.24□□□□□ -1.73
PKNOX1P55347 AC069061.3-201ENST00000582254 823 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
PKNOX1P55347 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.24□□□□□ -1.73
PKNOX1P55347 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.24□□□□□ -1.73
PKNOX1P55347 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.24□□□□□ -1.73
PKNOX1P55347 AC245128.3-201ENST00000594721 748 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 AP001160.4-201ENST00000596971 382 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 AC079587.1-201ENST00000603846 277 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 AC012603.1-201ENST00000606424 528 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 AC016911.1-201ENST00000613297 452 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.24□□□□□ -1.73
PKNOX1P55347 AL049536.1-201ENST00000625043 744 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.24□□□□□ -1.73
PKNOX1P55347 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.24□□□□□ -1.73
PKNOX1P55347 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PKNOX1P55347 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PKNOX1P55347 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PKNOX1P55347 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.24□□□□□ -1.73
PKNOX1P55347 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.24□□□□□ -1.73
PKNOX1P55347 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PKNOX1P55347 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PKNOX1P55347 AC012020.1-201ENST00000624541 1728 ntBASIC4.24□□□□□ -1.73
PKNOX1P55347 PHKBP1-201ENST00000450951 1951 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PKNOX1P55347 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.23□□□□□ -1.73
PKNOX1P55347 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PKNOX1P55347 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PKNOX1P55347 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PKNOX1P55347 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.23□□□□□ -1.73
PKNOX1P55347 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PKNOX1P55347 RPL23AP48-201ENST00000406913 488 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 RNU2-50P-201ENST00000410494 143 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.23□□□□□ -1.73
PKNOX1P55347 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.23□□□□□ -1.73
PKNOX1P55347 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.23□□□□□ -1.73
PKNOX1P55347 RPA2P2-201ENST00000419698 796 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 UQCRBP1-201ENST00000421129 336 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 AL353597.2-202ENST00000434901 373 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.23□□□□□ -1.73
PKNOX1P55347 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.23□□□□□ -1.73
PKNOX1P55347 AL451050.1-201ENST00000450126 415 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 MORF4L1P4-201ENST00000450245 976 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.23□□□□□ -1.73
PKNOX1P55347 CEACAMP6-201ENST00000452007 574 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 AC104629.2-201ENST00000468627 598 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.23□□□□□ -1.73
PKNOX1P55347 AC083829.1-201ENST00000503756 657 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 AC139783.2-201ENST00000504847 1145 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.23□□□□□ -1.73
PKNOX1P55347 PARP4P3-201ENST00000510265 317 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.23□□□□□ -1.73
PKNOX1P55347 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
PKNOX1P55347 HNRNPKP5-201ENST00000515300 253 ntBASIC4.23□□□□□ -1.73
PKNOX1P55347 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.23□□□□□ -1.73
PKNOX1P55347 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms