Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.86□□□□□ -1.47
MSH6P52701 VN1R32P-201ENST00000452234 905 ntBASIC5.86□□□□□ -1.47
MSH6P52701 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.86□□□□□ -1.47
MSH6P52701 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.86□□□□□ -1.47
MSH6P52701 SOD1P3-201ENST00000518682 454 ntBASIC5.86□□□□□ -1.47
MSH6P52701 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.86□□□□□ -1.47
MSH6P52701 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MSH6P52701 IMMP1LP1-201ENST00000605170 488 ntBASIC5.86□□□□□ -1.47
MSH6P52701 AL442067.2-201ENST00000614033 363 ntBASIC5.86□□□□□ -1.47
MSH6P52701 AL157762.1-201ENST00000619612 415 ntBASIC5.86□□□□□ -1.47
MSH6P52701 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.86□□□□□ -1.47
MSH6P52701 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MSH6P52701 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
MSH6P52701 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.86□□□□□ -1.47
MSH6P52701 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
MSH6P52701 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.85□□□□□ -1.47
MSH6P52701 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MSH6P52701 RNU1-83P-201ENST00000363426 164 ntBASIC5.85□□□□□ -1.47
MSH6P52701 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.85□□□□□ -1.47
MSH6P52701 EIF4A1P1-201ENST00000420241 934 ntBASIC5.85□□□□□ -1.47
MSH6P52701 NPM1P25-201ENST00000429734 854 ntBASIC5.85□□□□□ -1.47
MSH6P52701 AC007967.1-201ENST00000455422 1159 ntBASIC5.85□□□□□ -1.47
MSH6P52701 RPL38P1-201ENST00000460914 211 ntBASIC5.85□□□□□ -1.47
MSH6P52701 RNU1-95P-201ENST00000516357 160 ntBASIC5.85□□□□□ -1.47
MSH6P52701 RNU1-128P-201ENST00000516704 160 ntBASIC5.85□□□□□ -1.47
MSH6P52701 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.85□□□□□ -1.47
MSH6P52701 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.85□□□□□ -1.47
MSH6P52701 IGKV2D-19-201ENST00000523346 262 ntBASIC5.85□□□□□ -1.47
MSH6P52701 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.85□□□□□ -1.47
MSH6P52701 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.85□□□□□ -1.47
MSH6P52701 AC005412.1-201ENST00000580812 1049 ntBASIC5.85□□□□□ -1.47
MSH6P52701 AC091178.1-203ENST00000584586 279 ntBASIC5.85□□□□□ -1.47
MSH6P52701 OR2BH1P-201ENST00000608850 864 ntBASIC5.85□□□□□ -1.47
MSH6P52701 AC016542.2-201ENST00000624201 619 ntBASIC5.85□□□□□ -1.47
MSH6P52701 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.85□□□□□ -1.47
MSH6P52701 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.85□□□□□ -1.47
MSH6P52701 AP001157.1-201ENST00000550837 2339 ntBASIC5.85□□□□□ -1.47
MSH6P52701 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MSH6P52701 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MSH6P52701 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MSH6P52701 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
MSH6P52701 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
MSH6P52701 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.85□□□□□ -1.47
MSH6P52701 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.85□□□□□ -1.47
MSH6P52701 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.85□□□□□ -1.47
MSH6P52701 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MSH6P52701 CASC19-284ENST00000642142 1868 ntBASIC5.85□□□□□ -1.47
MSH6P52701 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.84□□□□□ -1.47
MSH6P52701 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
MSH6P52701 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
MSH6P52701 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.84□□□□□ -1.47
MSH6P52701 RNA5SP22-201ENST00000365393 109 ntBASIC5.84□□□□□ -1.47
MSH6P52701 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
MSH6P52701 MIR183-201ENST00000384958 110 ntBASIC5.84□□□□□ -1.47
MSH6P52701 AC007068.1-201ENST00000396690 844 ntBASIC5.84□□□□□ -1.47
MSH6P52701 SNORA74C-2-201ENST00000411179 201 ntBASIC5.84□□□□□ -1.47
MSH6P52701 AC062016.2-201ENST00000420950 676 ntBASIC5.84□□□□□ -1.47
MSH6P52701 HMGN2P31-201ENST00000432430 273 ntBASIC5.84□□□□□ -1.47
MSH6P52701 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.84□□□□□ -1.47
MSH6P52701 FTH1P25-201ENST00000447665 469 ntBASIC5.84□□□□□ -1.47
MSH6P52701 RPS4XP18-201ENST00000495480 763 ntBASIC5.84□□□□□ -1.47
MSH6P52701 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.84□□□□□ -1.47
MSH6P52701 FTH1P11-201ENST00000517577 551 ntBASIC5.84□□□□□ -1.47
MSH6P52701 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.84□□□□□ -1.47
MSH6P52701 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.84□□□□□ -1.47
MSH6P52701 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.84□□□□□ -1.47
MSH6P52701 AC022655.2-201ENST00000577280 318 ntBASIC5.84□□□□□ -1.47
MSH6P52701 MIR8069-1-201ENST00000616627 86 ntBASIC5.84□□□□□ -1.47
MSH6P52701 MIR8069-2-201ENST00000621412 86 ntBASIC5.84□□□□□ -1.47
MSH6P52701 AC015871.5-202ENST00000623252 701 ntBASIC5.84□□□□□ -1.47
MSH6P52701 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MSH6P52701 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.84□□□□□ -1.47
MSH6P52701 MAPK10-286ENST00000641208 8747 ntBASIC5.84□□□□□ -1.47
MSH6P52701 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MSH6P52701 TCP1P3-201ENST00000414406 1498 ntBASIC5.84□□□□□ -1.48
MSH6P52701 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.83□□□□□ -1.48
MSH6P52701 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MSH6P52701 AL672167.1-203ENST00000641299 2975 ntBASIC5.83□□□□□ -1.48
MSH6P52701 U8.11-201ENST00000384699 133 ntBASIC5.83□□□□□ -1.48
MSH6P52701 U8.12-201ENST00000384701 133 ntBASIC5.83□□□□□ -1.48
MSH6P52701 ATP5F1P4-201ENST00000397288 746 ntBASIC5.83□□□□□ -1.48
MSH6P52701 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.83□□□□□ -1.48
MSH6P52701 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.83□□□□□ -1.48
MSH6P52701 PRDX3P3-201ENST00000447765 522 ntBASIC5.83□□□□□ -1.48
MSH6P52701 NANOGP10-201ENST00000453325 895 ntBASIC5.83□□□□□ -1.48
MSH6P52701 DDX39BP2-208ENST00000453923 258 ntBASIC5.83□□□□□ -1.48
MSH6P52701 U8.18-201ENST00000459285 133 ntBASIC5.83□□□□□ -1.48
MSH6P52701 AC108751.2-201ENST00000469993 231 ntBASIC5.83□□□□□ -1.48
MSH6P52701 AC104164.2-201ENST00000496953 495 ntBASIC5.83□□□□□ -1.48
MSH6P52701 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.83□□□□□ -1.48
MSH6P52701 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.83□□□□□ -1.48
MSH6P52701 AC119751.5-201ENST00000514077 770 ntBASIC5.83□□□□□ -1.48
MSH6P52701 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.83□□□□□ -1.48
MSH6P52701 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.83□□□□□ -1.48
MSH6P52701 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.83□□□□□ -1.48
MSH6P52701 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.83□□□□□ -1.48
MSH6P52701 MIR5195-201ENST00000583555 115 ntBASIC5.83□□□□□ -1.48
MSH6P52701 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.83□□□□□ -1.48
MSH6P52701 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.83□□□□□ -1.48
MSH6P52701 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms