Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL591363.1-201ENST00000450091 483 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 AC002553.2-201ENST00000453217 340 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AC118758.1-202ENST00000454719 225 ntBASIC4.67□□□□□ -1.66
SOX2P48431 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX2P48431 RPL7AP52-201ENST00000458096 790 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AC021660.1-201ENST00000465006 554 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 RPL7P41-201ENST00000485823 957 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 MTCYBP16-201ENST00000509187 1129 ntBASIC4.67□□□□□ -1.66
SOX2P48431 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX2P48431 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX2P48431 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 EIF4A2P5-201ENST00000529914 499 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX2P48431 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 AC004825.1-201ENST00000555068 586 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AL390334.1-201ENST00000556395 450 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 ISCA1P3-201ENST00000577104 373 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 AC068790.2-201ENST00000602601 557 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AC135507.1-201ENST00000607214 561 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AC109583.2-201ENST00000617367 129 ntBASIC4.67□□□□□ -1.66
SOX2P48431 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AC048341.3-201ENST00000619323 491 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX2P48431 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 AC098679.4-201ENST00000624241 654 ntBASIC4.67□□□□□ -1.66
SOX2P48431 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 AC008079.2-201ENST00000623543 20396 ntBASIC4.67□□□□□ -1.66
SOX2P48431 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.67□□□□□ -1.66
SOX2P48431 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.67□□□□□ -1.66
SOX2P48431 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX2P48431 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX2P48431 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SOX2P48431 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SOX2P48431 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SOX2P48431 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX2P48431 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.66□□□□□ -1.66
SOX2P48431 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX2P48431 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 MIR375-201ENST00000362103 64 ntBASIC4.66□□□□□ -1.66
SOX2P48431 RNU6-619P-201ENST00000365146 108 ntBASIC4.66□□□□□ -1.66
SOX2P48431 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX2P48431 SNORA51.12-201ENST00000384448 134 ntBASIC4.66□□□□□ -1.66
SOX2P48431 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX2P48431 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX2P48431 AC211486.3-201ENST00000412694 621 ntBASIC4.66□□□□□ -1.66
SOX2P48431 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.66□□□□□ -1.66
SOX2P48431 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX2P48431 AL133173.1-201ENST00000423458 397 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX2P48431 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX2P48431 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX2P48431 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC073069.1-201ENST00000428657 441 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AL035407.1-201ENST00000429211 571 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC069154.1-201ENST00000432914 542 ntBASIC4.66□□□□□ -1.66
SOX2P48431 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.66□□□□□ -1.66
SOX2P48431 ELOCP8-201ENST00000439309 332 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC093155.1-201ENST00000440164 826 ntBASIC4.66□□□□□ -1.66
SOX2P48431 ELOCP15-201ENST00000442090 332 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AL591503.2-201ENST00000442314 1005 ntBASIC4.66□□□□□ -1.66
SOX2P48431 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AL606662.1-201ENST00000445763 553 ntBASIC4.66□□□□□ -1.66
SOX2P48431 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SOX2P48431 AC009961.3-201ENST00000449832 765 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AP006222.1-205ENST00000450734 457 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC097262.1-201ENST00000452559 548 ntBASIC4.66□□□□□ -1.66
SOX2P48431 HLA-DPA3-207ENST00000454398 229 ntBASIC4.66□□□□□ -1.66
SOX2P48431 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.66□□□□□ -1.66
SOX2P48431 HMGB1P4-201ENST00000455362 567 ntBASIC4.66□□□□□ -1.66
SOX2P48431 RPL23AP71-201ENST00000470966 469 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms