Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.61□□□□□ -1.67
PTPN4P29074 AC025445.1-201ENST00000502728 300 ntBASIC4.61□□□□□ -1.67
PTPN4P29074 AC093720.1-201ENST00000505681 714 ntBASIC4.61□□□□□ -1.67
PTPN4P29074 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN4P29074 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
PTPN4P29074 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.61□□□□□ -1.67
PTPN4P29074 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN4P29074 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN4P29074 AC022884.3-201ENST00000579571 248 ntBASIC4.61□□□□□ -1.67
PTPN4P29074 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.61□□□□□ -1.67
PTPN4P29074 AC068790.4-201ENST00000602474 263 ntBASIC4.61□□□□□ -1.67
PTPN4P29074 AL391834.1-201ENST00000609609 560 ntBASIC4.61□□□□□ -1.67
PTPN4P29074 AC019193.2-201ENST00000610012 634 ntBASIC4.61□□□□□ -1.67
PTPN4P29074 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN4P29074 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN4P29074 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN4P29074 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.61□□□□□ -1.67
PTPN4P29074 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.61□□□□□ -1.67
PTPN4P29074 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PTPN4P29074 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN4P29074 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PTPN4P29074 AL118496.1-201ENST00000440201 1812 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN4P29074 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN4P29074 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN4P29074 AC105074.1-201ENST00000623380 3095 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN4P29074 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PTPN4P29074 RNU4-39P-201ENST00000362455 127 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN4P29074 GLULP6-201ENST00000399502 913 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 RPS3AP23-201ENST00000401762 784 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 AC092017.2-201ENST00000427600 362 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN4P29074 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN4P29074 AC023512.1-201ENST00000444513 499 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 AC010733.1-201ENST00000451515 401 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN4P29074 AC021087.2-201ENST00000504656 1203 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 AC093770.1-201ENST00000511559 571 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN4P29074 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN4P29074 C1GALT1P3-201ENST00000522049 819 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN4P29074 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN4P29074 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN4P29074 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN4P29074 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN4P29074 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.6□□□□□ -1.67
PTPN4P29074 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.6□□□□□ -1.67
PTPN4P29074 AC068790.7-201ENST00000602347 528 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 AC008638.3-201ENST00000603341 463 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 AC133552.5-201ENST00000604266 540 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 AL162233.1-201ENST00000620014 944 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.6□□□□□ -1.67
PTPN4P29074 AL355852.1-201ENST00000454081 1771 ntBASIC4.6□□□□□ -1.67
PTPN4P29074 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
PTPN4P29074 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN4P29074 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PTPN4P29074 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.6□□□□□ -1.67
PTPN4P29074 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PTPN4P29074 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PTPN4P29074 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN4P29074 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PTPN4P29074 OR5T3-201ENST00000303059 1023 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PTPN4P29074 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN4P29074 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PTPN4P29074 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN4P29074 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PTPN4P29074 MTND3P20-201ENST00000407663 186 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 VN1R8P-201ENST00000407739 893 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.59□□□□□ -1.67
PTPN4P29074 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.59□□□□□ -1.67
PTPN4P29074 NCLP2-201ENST00000416078 1462 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 CYP1D1P-201ENST00000416662 1433 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN4P29074 AC004552.1-201ENST00000419089 348 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC069213.2-201ENST00000420238 366 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.59□□□□□ -1.67
PTPN4P29074 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC009480.2-201ENST00000422916 432 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 FAM204CP-201ENST00000424489 642 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 C4BPAP2-201ENST00000428434 478 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC073069.1-201ENST00000428657 441 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 RPL21P91-201ENST00000429231 479 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 MTND4LP14-201ENST00000429447 288 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC005154.2-201ENST00000438110 379 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN4P29074 AL353748.1-201ENST00000440753 474 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 RPL21P133-201ENST00000443666 476 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN4P29074 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.59□□□□□ -1.67
PTPN4P29074 RPS5P7-201ENST00000456664 608 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 RPS26P3-201ENST00000470205 348 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.59□□□□□ -1.67
PTPN4P29074 AC090543.2-201ENST00000483963 348 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC090013.1-201ENST00000485147 480 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 AC004057.1-201ENST00000485827 348 ntBASIC4.59□□□□□ -1.67
PTPN4P29074 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms