Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MFSD8-239ENST00000641590 2479 ntBASIC6.72□□□□□ -1.33
LIG1P18858 SAMMSON-213ENST00000641336 1521 ntBASIC6.72□□□□□ -1.33
LIG1P18858 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
LIG1P18858 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
LIG1P18858 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 RNA5SP453-201ENST00000362503 119 ntBASIC6.72□□□□□ -1.33
LIG1P18858 SNORA4.1-201ENST00000364263 144 ntBASIC6.72□□□□□ -1.33
LIG1P18858 RN7SKP78-201ENST00000364711 318 ntBASIC6.72□□□□□ -1.33
LIG1P18858 SNRPEP6-201ENST00000407465 277 ntBASIC6.72□□□□□ -1.33
LIG1P18858 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
LIG1P18858 USP9YP6-201ENST00000413550 854 ntBASIC6.72□□□□□ -1.33
LIG1P18858 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.72□□□□□ -1.33
LIG1P18858 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.72□□□□□ -1.33
LIG1P18858 AC009480.2-201ENST00000422916 432 ntBASIC6.72□□□□□ -1.33
LIG1P18858 GLRXP1-201ENST00000423261 334 ntBASIC6.72□□□□□ -1.33
LIG1P18858 OR8F1P-201ENST00000425243 930 ntBASIC6.72□□□□□ -1.33
LIG1P18858 RWDD4P2-201ENST00000426392 563 ntBASIC6.72□□□□□ -1.33
LIG1P18858 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.72□□□□□ -1.33
LIG1P18858 AC099670.2-201ENST00000435130 321 ntBASIC6.72□□□□□ -1.33
LIG1P18858 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
LIG1P18858 PA2G4P6-201ENST00000438325 1197 ntBASIC6.72□□□□□ -1.33
LIG1P18858 AL663074.2-201ENST00000440621 479 ntBASIC6.72□□□□□ -1.33
LIG1P18858 EIF5AP4-201ENST00000441206 465 ntBASIC6.72□□□□□ -1.33
LIG1P18858 AC097463.1-201ENST00000447288 481 ntBASIC6.72□□□□□ -1.33
LIG1P18858 RPS23P9-201ENST00000448848 438 ntBASIC6.72□□□□□ -1.33
LIG1P18858 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.72□□□□□ -1.33
LIG1P18858 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 OR6C5P-201ENST00000452388 923 ntBASIC6.72□□□□□ -1.33
LIG1P18858 USP9YP34-201ENST00000453983 808 ntBASIC6.72□□□□□ -1.33
LIG1P18858 HSPE1P22-201ENST00000456856 327 ntBASIC6.72□□□□□ -1.33
LIG1P18858 AMD1P1-201ENST00000457220 922 ntBASIC6.72□□□□□ -1.33
LIG1P18858 AC079080.1-201ENST00000479841 822 ntBASIC6.72□□□□□ -1.33
LIG1P18858 GAPDHP39-201ENST00000481866 979 ntBASIC6.72□□□□□ -1.33
LIG1P18858 PSMA2P2-201ENST00000504319 686 ntBASIC6.72□□□□□ -1.33
LIG1P18858 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.72□□□□□ -1.33
LIG1P18858 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.72□□□□□ -1.33
LIG1P18858 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.72□□□□□ -1.33
LIG1P18858 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
LIG1P18858 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.72□□□□□ -1.33
LIG1P18858 AC104108.1-201ENST00000509930 412 ntBASIC6.72□□□□□ -1.33
LIG1P18858 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.72□□□□□ -1.33
LIG1P18858 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.72□□□□□ -1.33
LIG1P18858 AC083923.1-201ENST00000523708 376 ntBASIC6.72□□□□□ -1.33
LIG1P18858 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.72□□□□□ -1.33
LIG1P18858 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.72□□□□□ -1.33
LIG1P18858 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.72□□□□□ -1.33
LIG1P18858 NIFKP8-201ENST00000560500 874 ntBASIC6.72□□□□□ -1.33
LIG1P18858 MIR4528-201ENST00000577763 90 ntBASIC6.72□□□□□ -1.33
LIG1P18858 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.72□□□□□ -1.33
LIG1P18858 AC005962.2-201ENST00000611427 652 ntBASIC6.72□□□□□ -1.33
LIG1P18858 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.72□□□□□ -1.33
LIG1P18858 AC012150.2-201ENST00000621300 544 ntBASIC6.72□□□□□ -1.33
LIG1P18858 LINC01739-205ENST00000641890 573 ntBASIC6.72□□□□□ -1.33
LIG1P18858 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.72□□□□□ -1.33
LIG1P18858 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.72□□□□□ -1.33
LIG1P18858 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.72□□□□□ -1.33
LIG1P18858 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.72□□□□□ -1.33
LIG1P18858 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.72□□□□□ -1.33
LIG1P18858 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.72□□□□□ -1.33
LIG1P18858 TEX21P-201ENST00000447107 1476 ntBASIC6.72□□□□□ -1.33
LIG1P18858 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
LIG1P18858 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
LIG1P18858 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LIG1P18858 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LIG1P18858 RBMY1HP-201ENST00000382759 1389 ntBASIC6.71□□□□□ -1.33
LIG1P18858 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LIG1P18858 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LIG1P18858 AC097461.1-201ENST00000568928 2821 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.71□□□□□ -1.34
LIG1P18858 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.71□□□□□ -1.34
LIG1P18858 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
LIG1P18858 SNORA72.1-201ENST00000363485 129 ntBASIC6.71□□□□□ -1.34
LIG1P18858 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
LIG1P18858 SNORD65.1-201ENST00000390889 71 ntBASIC6.71□□□□□ -1.34
LIG1P18858 HMGB3P7-201ENST00000400214 611 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AL139098.1-201ENST00000407291 389 ntBASIC6.71□□□□□ -1.34
LIG1P18858 SNORA11.3-201ENST00000408471 128 ntBASIC6.71□□□□□ -1.34
LIG1P18858 MIR1282-201ENST00000408865 101 ntBASIC6.71□□□□□ -1.34
LIG1P18858 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
LIG1P18858 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.71□□□□□ -1.34
LIG1P18858 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LIG1P18858 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.71□□□□□ -1.34
LIG1P18858 AC245054.1-201ENST00000420944 258 ntBASIC6.71□□□□□ -1.34
LIG1P18858 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.71□□□□□ -1.34
LIG1P18858 BX276092.6-201ENST00000430476 250 ntBASIC6.71□□□□□ -1.34
LIG1P18858 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.71□□□□□ -1.34
LIG1P18858 USP12PX-201ENST00000432383 1057 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.71□□□□□ -1.34
LIG1P18858 AC015983.1-201ENST00000441577 373 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AC114755.5-201ENST00000447760 831 ntBASIC6.71□□□□□ -1.34
LIG1P18858 MTND3P10-201ENST00000450967 341 ntBASIC6.71□□□□□ -1.34
LIG1P18858 CALM1P2-201ENST00000452941 448 ntBASIC6.71□□□□□ -1.34
LIG1P18858 PPIAP27-201ENST00000453800 265 ntBASIC6.71□□□□□ -1.34
LIG1P18858 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms