Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.52□□□□□ -1.69
APOEP02649 RPL23AP97-201ENST00000568955 471 ntBASIC4.52□□□□□ -1.69
APOEP02649 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.52□□□□□ -1.69
APOEP02649 AL139286.1-201ENST00000604465 483 ntBASIC4.52□□□□□ -1.69
APOEP02649 AL021997.2-201ENST00000615674 271 ntBASIC4.52□□□□□ -1.69
APOEP02649 RNU6-368P-201ENST00000620928 107 ntBASIC4.52□□□□□ -1.69
APOEP02649 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
APOEP02649 AC010809.3-201ENST00000621310 641 ntBASIC4.52□□□□□ -1.69
APOEP02649 RNU6-538P-201ENST00000622329 107 ntBASIC4.52□□□□□ -1.69
APOEP02649 AP003497.2-201ENST00000624220 967 ntBASIC4.52□□□□□ -1.69
APOEP02649 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.52□□□□□ -1.69
APOEP02649 FP325313.1-201ENST00000638228 703 ntBASIC4.52□□□□□ -1.69
APOEP02649 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.52□□□□□ -1.69
APOEP02649 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
APOEP02649 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.52□□□□□ -1.69
APOEP02649 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.52□□□□□ -1.69
APOEP02649 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
APOEP02649 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
APOEP02649 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
APOEP02649 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
APOEP02649 RNU6-729P-201ENST00000384399 107 ntBASIC4.51□□□□□ -1.69
APOEP02649 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.51□□□□□ -1.69
APOEP02649 GSTM3P2-201ENST00000412746 530 ntBASIC4.51□□□□□ -1.69
APOEP02649 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.51□□□□□ -1.69
APOEP02649 AC004552.1-201ENST00000419089 348 ntBASIC4.51□□□□□ -1.69
APOEP02649 CEACAMP1-201ENST00000434624 1035 ntBASIC4.51□□□□□ -1.69
APOEP02649 RPL23AP52-201ENST00000439311 478 ntBASIC4.51□□□□□ -1.69
APOEP02649 AC104306.1-201ENST00000449702 371 ntBASIC4.51□□□□□ -1.69
APOEP02649 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.51□□□□□ -1.69
APOEP02649 RPS20P4-201ENST00000461659 355 ntBASIC4.51□□□□□ -1.69
APOEP02649 RPS26P3-201ENST00000470205 348 ntBASIC4.51□□□□□ -1.69
APOEP02649 AC109327.1-201ENST00000471666 403 ntBASIC4.51□□□□□ -1.69
APOEP02649 AC090543.2-201ENST00000483963 348 ntBASIC4.51□□□□□ -1.69
APOEP02649 AC004057.1-201ENST00000485827 348 ntBASIC4.51□□□□□ -1.69
APOEP02649 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.51□□□□□ -1.69
APOEP02649 AC106806.2-201ENST00000509365 500 ntBASIC4.51□□□□□ -1.69
APOEP02649 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
APOEP02649 PSMB7P1-201ENST00000556349 514 ntBASIC4.51□□□□□ -1.69
APOEP02649 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.51□□□□□ -1.69
APOEP02649 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
APOEP02649 AC021483.2-201ENST00000567415 758 ntBASIC4.51□□□□□ -1.69
APOEP02649 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.51□□□□□ -1.69
APOEP02649 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.51□□□□□ -1.69
APOEP02649 AC078899.5-201ENST00000612475 178 ntBASIC4.51□□□□□ -1.69
APOEP02649 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.51□□□□□ -1.69
APOEP02649 AC011944.2-201ENST00000624440 683 ntBASIC4.51□□□□□ -1.69
APOEP02649 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
APOEP02649 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
APOEP02649 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.51□□□□□ -1.69
APOEP02649 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.51□□□□□ -1.69
APOEP02649 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
APOEP02649 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
APOEP02649 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
APOEP02649 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
APOEP02649 RNU1-15P-201ENST00000353977 144 ntBASIC4.5□□□□□ -1.69
APOEP02649 RPL32P3-201ENST00000359025 275 ntBASIC4.5□□□□□ -1.69
APOEP02649 SNORA62-201ENST00000365493 153 ntBASIC4.5□□□□□ -1.69
APOEP02649 AC097374.1-203ENST00000400783 485 ntBASIC4.5□□□□□ -1.69
APOEP02649 AL035696.2-201ENST00000407941 709 ntBASIC4.5□□□□□ -1.69
APOEP02649 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.5□□□□□ -1.69
APOEP02649 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.5□□□□□ -1.69
APOEP02649 COX6CP17-201ENST00000421389 185 ntBASIC4.5□□□□□ -1.69
APOEP02649 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.5□□□□□ -1.69
APOEP02649 TPT1P12-201ENST00000448968 492 ntBASIC4.5□□□□□ -1.69
APOEP02649 APOOP2-201ENST00000461561 539 ntBASIC4.5□□□□□ -1.69
APOEP02649 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
APOEP02649 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
APOEP02649 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.5□□□□□ -1.69
APOEP02649 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.5□□□□□ -1.69
APOEP02649 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.5□□□□□ -1.69
APOEP02649 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.5□□□□□ -1.69
APOEP02649 AC023575.1-201ENST00000580510 358 ntBASIC4.5□□□□□ -1.69
APOEP02649 IPO5P1-202ENST00000600039 287 ntBASIC4.5□□□□□ -1.69
APOEP02649 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.5□□□□□ -1.69
APOEP02649 QTRT1P1-201ENST00000604344 1078 ntBASIC4.5□□□□□ -1.69
APOEP02649 AL445423.1-201ENST00000609941 536 ntBASIC4.5□□□□□ -1.69
APOEP02649 MIR6758-201ENST00000620653 63 ntBASIC4.5□□□□□ -1.69
APOEP02649 AL139254.3-201ENST00000641097 674 ntBASIC4.5□□□□□ -1.69
APOEP02649 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
APOEP02649 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
APOEP02649 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.5□□□□□ -1.69
APOEP02649 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
APOEP02649 AC090971.4-201ENST00000560291 1800 ntBASIC4.5□□□□□ -1.69
APOEP02649 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
APOEP02649 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
APOEP02649 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.49□□□□□ -1.69
APOEP02649 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOEP02649 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.49□□□□□ -1.69
APOEP02649 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.49□□□□□ -1.69
APOEP02649 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.49□□□□□ -1.69
APOEP02649 MAPK10-304ENST00000641341 3984 ntBASIC4.49□□□□□ -1.69
APOEP02649 OR11H5P-202ENST00000641612 1325 ntBASIC4.49□□□□□ -1.69
APOEP02649 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
APOEP02649 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
APOEP02649 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOEP02649 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.49□□□□□ -1.69
APOEP02649 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.49□□□□□ -1.69
APOEP02649 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.49□□□□□ -1.69
APOEP02649 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
APOEP02649 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms