Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL022311.1-201ENST00000623726 19416 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMAD6O43541 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SMAD6O43541 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMAD6O43541 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SMAD6O43541 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SMAD6O43541 RNU4-28P-201ENST00000364739 141 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 RNU6-906P-201ENST00000384700 70 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 U3.30-201ENST00000391308 210 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SMAD6O43541 AL355615.1-201ENST00000406187 641 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 EIF4A1P3-201ENST00000411521 244 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 NPM1P40-201ENST00000412758 733 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.94□□□□□ -1.62
SMAD6O43541 BX664727.1-201ENST00000416024 466 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.94□□□□□ -1.62
SMAD6O43541 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.94□□□□□ -1.62
SMAD6O43541 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.94□□□□□ -1.62
SMAD6O43541 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.94□□□□□ -1.62
SMAD6O43541 MTND1P34-201ENST00000438556 671 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.94□□□□□ -1.62
SMAD6O43541 CASP3P1-201ENST00000446037 609 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 RPL21P6-201ENST00000479171 504 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.94□□□□□ -1.62
SMAD6O43541 UBA52P3-201ENST00000491303 382 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 AL117351.2-201ENST00000513571 157 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 Y_RNA.655-201ENST00000515919 96 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.94□□□□□ -1.62
SMAD6O43541 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SMAD6O43541 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.94□□□□□ -1.62
SMAD6O43541 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.94□□□□□ -1.62
SMAD6O43541 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.94□□□□□ -1.62
SMAD6O43541 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 AC093014.1-201ENST00000548926 724 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.94□□□□□ -1.62
SMAD6O43541 AC006349.1-201ENST00000555526 235 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SMAD6O43541 AGGF1P6-201ENST00000569213 976 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.94□□□□□ -1.62
SMAD6O43541 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.94□□□□□ -1.62
SMAD6O43541 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.94□□□□□ -1.62
SMAD6O43541 AC084373.1-201ENST00000603311 235 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.94□□□□□ -1.62
SMAD6O43541 CR381572.2-201ENST00000624852 397 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.94□□□□□ -1.62
SMAD6O43541 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SMAD6O43541 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SMAD6O43541 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMAD6O43541 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMAD6O43541 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.94□□□□□ -1.62
SMAD6O43541 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMAD6O43541 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.94□□□□□ -1.62
SMAD6O43541 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.94□□□□□ -1.62
SMAD6O43541 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SMAD6O43541 AC087565.3-202ENST00000642085 1603 ntBASIC4.94□□□□□ -1.62
SMAD6O43541 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SMAD6O43541 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 Z98755.1-201ENST00000407015 1384 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.93□□□□□ -1.62
SMAD6O43541 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.93□□□□□ -1.62
SMAD6O43541 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SMAD6O43541 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SMAD6O43541 AC008549.2-201ENST00000333482 706 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 RNVU1-6-201ENST00000364688 164 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SMAD6O43541 MIR513B-201ENST00000385136 84 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SMAD6O43541 AC093719.1-202ENST00000392735 373 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMAD6O43541 RN7SKP100-201ENST00000411258 284 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.93□□□□□ -1.62
SMAD6O43541 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.93□□□□□ -1.62
SMAD6O43541 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.93□□□□□ -1.62
SMAD6O43541 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.93□□□□□ -1.62
SMAD6O43541 AL158050.1-201ENST00000416077 457 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.93□□□□□ -1.62
SMAD6O43541 AL645608.4-201ENST00000423619 154 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 USP9YP11-201ENST00000427537 717 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.93□□□□□ -1.62
SMAD6O43541 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.93□□□□□ -1.62
SMAD6O43541 FHP1-201ENST00000442741 703 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 VN1R25P-201ENST00000443385 738 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 OR1H1P-201ENST00000448731 937 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.93□□□□□ -1.62
SMAD6O43541 AL356981.1-201ENST00000454879 684 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.93□□□□□ -1.62
SMAD6O43541 AC010486.2-201ENST00000505572 483 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 HMGB1P47-201ENST00000511281 589 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 AF186190.1-201ENST00000517470 480 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 OR8A2P-201ENST00000528631 952 ntBASIC4.93□□□□□ -1.62
SMAD6O43541 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.93□□□□□ -1.62
SMAD6O43541 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms