Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 BX510359.2-201ENST00000417920 305 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 AC062016.2-201ENST00000420950 676 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 RPL12P28-201ENST00000430852 489 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC28A1O00337 ELOCP3-201ENST00000439303 348 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 AC069540.1-201ENST00000446320 988 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 AC092685.1-201ENST00000447960 1243 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 AC239809.1-201ENST00000450470 217 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 APOOP2-201ENST00000461561 539 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 AC090013.1-201ENST00000485147 480 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC28A1O00337 MTND3P24-201ENST00000506306 329 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC28A1O00337 SOX5P1-201ENST00000524155 1127 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 AL110118.1-201ENST00000553543 400 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC28A1O00337 AC009117.1-201ENST00000563948 554 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC28A1O00337 AC110743.1-201ENST00000584870 478 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC28A1O00337 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC28A1O00337 AC007423.1-201ENST00000605009 627 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 AL353726.1-201ENST00000614041 1000 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC28A1O00337 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC28A1O00337 AC020923.1-201ENST00000624021 917 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC28A1O00337 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC28A1O00337 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC28A1O00337 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC28A1O00337 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC28A1O00337 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC28A1O00337 AC093535.2-201ENST00000624769 2326 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 ZNF137P-201ENST00000456718 1920 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
SLC28A1O00337 CIR1P2-201ENST00000514821 1342 ntBASIC4.4□□□□□ -1.71
SLC28A1O00337 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC28A1O00337 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SLC28A1O00337 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SLC28A1O00337 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC28A1O00337 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC28A1O00337 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SLC28A1O00337 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SLC28A1O00337 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC28A1O00337 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC28A1O00337 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC28A1O00337 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC28A1O00337 ASNSP1-201ENST00000518311 1939 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 AC006042.3-201ENST00000454684 1469 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC28A1O00337 AC114546.3-201ENST00000623582 1734 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SLC28A1O00337 METTL21EP-201ENST00000298105 713 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 SNORA71.2-201ENST00000364941 134 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 RNA5SP22-201ENST00000365393 109 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC28A1O00337 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 RNU1-44P-201ENST00000384453 163 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.39□□□□□ -1.71
SLC28A1O00337 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC28A1O00337 USP9YP19-201ENST00000412165 485 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 CENPIP1-201ENST00000425713 902 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC28A1O00337 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC28A1O00337 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 TPMTP4-201ENST00000450749 678 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AC063943.1-201ENST00000465434 453 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AC100770.1-201ENST00000532310 322 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 OSBPL9P3-201ENST00000534523 595 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 AC025260.1-201ENST00000548858 430 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AC105129.1-201ENST00000560250 297 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 MIR3667-201ENST00000581025 74 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC28A1O00337 ZNF92P2-201ENST00000600543 1059 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AL512782.1-201ENST00000603093 364 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 AC103792.1-201ENST00000603591 919 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC28A1O00337 AC011374.2-201ENST00000607135 526 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 AP002360.3-201ENST00000607673 710 ntBASIC4.39□□□□□ -1.71
SLC28A1O00337 AC245389.2-201ENST00000616023 576 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms