Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AL137845.2-201ENST00000444292 988 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 Z80107.2-201ENST00000445127 392 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC105399.1-202ENST00000447303 205 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC005726.1-201ENST00000494679 427 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC078918.1-201ENST00000498515 228 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC093763.2-201ENST00000505334 1223 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AL136520.1-202ENST00000555494 763 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 MTCO1P40-201ENST00000574371 625 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 BPTFP1-201ENST00000579209 492 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC022069.1-201ENST00000582910 658 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC005520.3-201ENST00000602874 370 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC025588.3-201ENST00000604182 274 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AL390816.3-201ENST00000604527 1066 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AP004247.3-201ENST00000608682 624 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AL359893.1-201ENST00000447628 1580 ntBASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGB1P1B2RPK0 AL157700.1-201ENST00000561973 1432 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 DHX40P1-201ENST00000588725 1412 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 PABPC1P7-201ENST00000413177 1513 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC007685.1-201ENST00000329806 452 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 RNA5SP477-201ENST00000362639 119 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 RNA5SP394-201ENST00000364216 119 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 RNA5SP90-201ENST00000364801 99 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 HMGB1P20-201ENST00000402555 677 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 SFR1P1-201ENST00000403720 688 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AL080315.1-201ENST00000406055 466 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 RPS27AP12-201ENST00000429552 465 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC093414.1-201ENST00000434712 514 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 RPL7P59-201ENST00000447700 943 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 OR51B8P-201ENST00000449892 769 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 CDC42P1-201ENST00000456658 548 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC091959.2-201ENST00000477363 321 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AP004242.1-201ENST00000533701 349 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC092470.1-201ENST00000546187 132 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC107958.1-201ENST00000556576 290 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC133794.1-201ENST00000602731 914 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AL023583.1-201ENST00000607518 1143 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 CU639417.4-201ENST00000623928 207 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 AC108751.5-201ENST00000492880 1336 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 GABPAP-201ENST00000419271 1356 ntBASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
HMGB1P1B2RPK0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 COX6B1P3-201ENST00000312310 260 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 SNORA2.3-201ENST00000383920 135 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 FABP12P1-201ENST00000401911 322 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 MIR1250-201ENST00000408098 113 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 RNU4-78P-201ENST00000410940 126 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AC244098.2-201ENST00000422068 99 ntBASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB1P1B2RPK0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms