Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RNU6-513P-201ENST00000516104 104 ntBASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 AC090948.2-201ENST00000607363 564 ntBASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 SNX18P1Y-201ENST00000616231 511 ntBASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 AC006840.1-201ENST00000623069 542 ntBASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMIM28A0A1B0GU29 NOL8P1-201ENST00000508336 3529 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 AC093849.1-201ENST00000563631 2209 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 MIR372-201ENST00000362225 67 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 RNU4-23P-201ENST00000362839 140 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 SNORA57.1-201ENST00000391227 145 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 DHFRP5-201ENST00000406944 564 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 AC108032.1-201ENST00000416706 207 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 YY1P1-201ENST00000427625 668 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 AL356276.2-201ENST00000435919 558 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 RPL5P32-201ENST00000454085 879 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 RN7SL817P-201ENST00000480777 288 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 RNA5SP360-201ENST00000516555 118 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 DUX4L52-201ENST00000549363 777 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 AC027176.2-201ENST00000559166 746 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 BNIP3P5-201ENST00000562290 498 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 AC093591.2-201ENST00000565254 3843 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 AC024941.1-201ENST00000612250 334 ntBASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMIM28A0A1B0GU29 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AC027228.2-201ENST00000567141 2154 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AC015813.6-201ENST00000624409 5808 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 ENSAP1-201ENST00000392855 326 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AL607077.1-201ENST00000401718 499 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 MIR1179-201ENST00000408703 91 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 RPL23AP46-201ENST00000438548 490 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AC020898.1-201ENST00000474167 787 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AL132838.2-201ENST00000492041 314 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AC108145.1-201ENST00000503770 153 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 NPM1P52-201ENST00000518264 846 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 OR8R1P-201ENST00000543943 764 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AC022655.2-201ENST00000577280 318 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 VN1R85P-201ENST00000601587 426 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AL158062.1-201ENST00000619632 745 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 AC092435.4-201ENST00000623012 4159 ntBASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
SMIM28A0A1B0GU29 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMIM28A0A1B0GU29 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms