Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC008897.1-201ENST00000494006 347 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AC098799.3-201ENST00000506095 438 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 RNU6-347P-201ENST00000516658 105 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AP006289.1-201ENST00000538089 277 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 NPM1P47-201ENST00000560843 856 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AC233266.2-201ENST00000567067 528 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AC018552.3-201ENST00000567416 561 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AC209154.1-201ENST00000582156 337 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AC092474.3-201ENST00000603022 568 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AL353600.1-201ENST00000608148 251 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AL391684.1-202ENST00000641293 1636 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 AL592182.3-201ENST00000642132 3304 ntBASIC4.38□□□□□ -1.71
ATG4BQ9Y4P1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 OR14L1P-202ENST00000641545 3009 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC079741.1-201ENST00000321498 212 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC013404.1-201ENST00000413068 249 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 RPL21P43-201ENST00000425440 472 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC006326.1-201ENST00000445465 787 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC017099.1-201ENST00000448261 1028 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 RPS29P33-201ENST00000456717 146 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 SCARNA10-201ENST00000459255 330 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 RPL7P48-201ENST00000461513 746 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC104763.1-201ENST00000475274 360 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 RPL12P20-201ENST00000475538 479 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC007016.1-201ENST00000512110 244 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC103833.1-201ENST00000517442 172 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 MTND2P7-201ENST00000521337 640 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 MIR548Y-201ENST00000582739 110 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC068790.7-201ENST00000602347 528 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC007423.1-201ENST00000605009 627 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC135178.6-201ENST00000605314 398 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 uc_338.18-201ENST00000615451 175 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC234782.5-201ENST00000617723 324 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AP004607.9-201ENST00000618202 316 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 AL645927.2-201ENST00000618350 349 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 MIR7703-201ENST00000620784 77 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 U3.53-201ENST00000628922 216 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 MFSD8-216ENST00000641147 4009 ntBASIC4.37□□□□□ -1.71
ATG4BQ9Y4P1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 LINC01109-201ENST00000603837 3081 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 RNU6-398P-201ENST00000384143 109 ntBASIC4.36□□□□□ -1.71
ATG4BQ9Y4P1 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms