Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC091046.3-201ENST00000631455 1574 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC027290.2-201ENST00000623210 18662 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 AC090017.1-201ENST00000548612 1779 ntBASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.24□□□□□ -1.57
CLIP2Q9UDT6 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 AC008033.1-201ENST00000216407 1162 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 AL139095.3-201ENST00000419672 1203 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 AL392003.1-201ENST00000434394 243 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 PHBP16-201ENST00000446318 950 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 DHFRP3-201ENST00000455595 559 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 RN7SL98P-201ENST00000462271 300 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 RN7SL303P-201ENST00000469773 251 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 AC109327.1-201ENST00000471666 403 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 AC108022.1-201ENST00000493466 478 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 EIF1AXP2-201ENST00000555940 413 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 AL049874.4-201ENST00000557593 255 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 AC090312.1-201ENST00000580637 348 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 MIR3939-201ENST00000582614 106 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 BPIFA4P-203ENST00000603168 689 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 SNX18P1Y-201ENST00000616231 511 ntBASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP2Q9UDT6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 OR5P1P-201ENST00000299512 925 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 OR4K17-201ENST00000315543 1032 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AC240504.1-201ENST00000395709 845 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 EIF4EP1-201ENST00000422311 642 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 MTND4LP13-201ENST00000425022 298 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 RNA5SP446-201ENST00000515955 82 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AC100770.1-201ENST00000532310 322 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AC136624.4-201ENST00000573044 370 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 RPL7P50-201ENST00000600588 727 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AL592494.3-201ENST00000609485 464 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AC023509.5-201ENST00000617434 807 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 MIR6891-201ENST00000618788 93 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AL023881.1-201ENST00000621088 301 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AP000843.1-201ENST00000624880 701 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 AC139769.1-204ENST00000472297 1931 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 ASNSP1-201ENST00000518311 1939 ntBASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP2Q9UDT6 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.21□□□□□ -1.57
CLIP2Q9UDT6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 MIR331-201ENST00000362302 94 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 RNU1-108P-201ENST00000362556 161 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 AC011933.1-201ENST00000413334 321 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 OR2X1P-201ENST00000421144 687 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 ARAFP1-201ENST00000422172 605 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 GSTA7P-201ENST00000438425 448 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 AC116533.1-201ENST00000459748 321 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 PPIAP21-201ENST00000464473 501 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 RPL5P30-201ENST00000465511 891 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 AK4P6-201ENST00000505168 528 ntBASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.21□□□□□ -1.58
CLIP2Q9UDT6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms